Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HADHAP40939 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HADHAP40939 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HADHAP40939 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
HADHAP40939 AC073130.3-201ENST00000624389 2278 ntBASIC20.83■□□□□ 0.93
HADHAP40939 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HADHAP40939 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HADHAP40939 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
HADHAP40939 KRT18P5-201ENST00000436075 1291 ntBASIC20.83■□□□□ 0.93
HADHAP40939 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.83■□□□□ 0.93
HADHAP40939 AL162430.1-201ENST00000480705 870 ntBASIC20.83■□□□□ 0.93
HADHAP40939 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.83■□□□□ 0.93
HADHAP40939 SLC7A5P1-201ENST00000568957 537 ntBASIC20.83■□□□□ 0.93
HADHAP40939 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.83■□□□□ 0.93
HADHAP40939 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HADHAP40939 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HADHAP40939 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HADHAP40939 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HADHAP40939 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.83■□□□□ 0.92
HADHAP40939 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HADHAP40939 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
HADHAP40939 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HADHAP40939 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.82■□□□□ 0.92
HADHAP40939 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.82■□□□□ 0.92
HADHAP40939 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 SLC7A5P2-201ENST00000553010 536 ntBASIC20.82■□□□□ 0.92
HADHAP40939 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.82■□□□□ 0.92
HADHAP40939 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.82■□□□□ 0.92
HADHAP40939 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HADHAP40939 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HADHAP40939 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HADHAP40939 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
HADHAP40939 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.81■□□□□ 0.92
HADHAP40939 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.81■□□□□ 0.92
HADHAP40939 AC245052.3-201ENST00000450182 901 ntBASIC20.81■□□□□ 0.92
HADHAP40939 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.81■□□□□ 0.92
HADHAP40939 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.81■□□□□ 0.92
HADHAP40939 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HADHAP40939 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HADHAP40939 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HADHAP40939 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HADHAP40939 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HADHAP40939 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HADHAP40939 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.8■□□□□ 0.92
HADHAP40939 PLK5-205ENST00000642079 1969 ntBASIC20.8■□□□□ 0.92
HADHAP40939 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HADHAP40939 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HADHAP40939 AC121338.2-201ENST00000622535 1744 ntBASIC20.8■□□□□ 0.92
HADHAP40939 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HADHAP40939 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HADHAP40939 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.8■□□□□ 0.92
HADHAP40939 SLC25A24-204ENST00000569674 2357 ntBASIC20.8■□□□□ 0.92
HADHAP40939 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HADHAP40939 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HADHAP40939 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HADHAP40939 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HADHAP40939 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HADHAP40939 GABARAPL3-202ENST00000624044 1851 ntBASIC20.79■□□□□ 0.92
HADHAP40939 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HADHAP40939 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HADHAP40939 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.79■□□□□ 0.92
HADHAP40939 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.79■□□□□ 0.92
HADHAP40939 LINC01006-201ENST00000333319 2292 ntBASIC20.79■□□□□ 0.92
HADHAP40939 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.79■□□□□ 0.92
HADHAP40939 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.79■□□□□ 0.92
HADHAP40939 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.79■□□□□ 0.92
HADHAP40939 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HADHAP40939 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.79■□□□□ 0.92
HADHAP40939 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.79■□□□□ 0.92
HADHAP40939 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.79■□□□□ 0.92
HADHAP40939 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.79■□□□□ 0.92
HADHAP40939 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.79■□□□□ 0.92
HADHAP40939 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.79■□□□□ 0.92
HADHAP40939 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HADHAP40939 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HADHAP40939 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HADHAP40939 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
HADHAP40939 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms