Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SCNN1AP37088 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
SCNN1AP37088 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.53■■□□□ 1.04
SCNN1AP37088 AC016405.3-201ENST00000607710 860 ntBASIC21.53■■□□□ 1.04
SCNN1AP37088 AC100791.3-201ENST00000617619 330 ntBASIC21.53■■□□□ 1.04
SCNN1AP37088 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.53■■□□□ 1.04
SCNN1AP37088 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCNN1AP37088 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SCNN1AP37088 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.53■■□□□ 1.04
SCNN1AP37088 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SCNN1AP37088 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SCNN1AP37088 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCNN1AP37088 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SCNN1AP37088 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCNN1AP37088 CDCA4P2-201ENST00000441182 718 ntBASIC21.52■■□□□ 1.04
SCNN1AP37088 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.52■■□□□ 1.04
SCNN1AP37088 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.52■■□□□ 1.04
SCNN1AP37088 RAP2CP1-201ENST00000605103 478 ntBASIC21.52■■□□□ 1.04
SCNN1AP37088 MIR2861-201ENST00000636310 90 ntBASIC21.52■■□□□ 1.04
SCNN1AP37088 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCNN1AP37088 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCNN1AP37088 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCNN1AP37088 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SCNN1AP37088 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SCNN1AP37088 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.52■■□□□ 1.03
SCNN1AP37088 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SCNN1AP37088 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SCNN1AP37088 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
SCNN1AP37088 AC007225.1-201ENST00000566331 1836 ntBASIC21.51■■□□□ 1.03
SCNN1AP37088 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.51■■□□□ 1.03
SCNN1AP37088 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SCNN1AP37088 CYP2T1P-201ENST00000432607 1285 ntBASIC21.51■■□□□ 1.03
SCNN1AP37088 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.51■■□□□ 1.03
SCNN1AP37088 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.51■■□□□ 1.03
SCNN1AP37088 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.51■■□□□ 1.03
SCNN1AP37088 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.51■■□□□ 1.03
SCNN1AP37088 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.51■■□□□ 1.03
SCNN1AP37088 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.51■■□□□ 1.03
SCNN1AP37088 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SCNN1AP37088 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.51■■□□□ 1.03
SCNN1AP37088 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCNN1AP37088 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SCNN1AP37088 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCNN1AP37088 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.51■■□□□ 1.03
SCNN1AP37088 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCNN1AP37088 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
SCNN1AP37088 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.5■■□□□ 1.03
SCNN1AP37088 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SCNN1AP37088 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SCNN1AP37088 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.5■■□□□ 1.03
SCNN1AP37088 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.5■■□□□ 1.03
SCNN1AP37088 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SCNN1AP37088 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.5■■□□□ 1.03
SCNN1AP37088 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SCNN1AP37088 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SCNN1AP37088 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SCNN1AP37088 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.5■■□□□ 1.03
SCNN1AP37088 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.49■■□□□ 1.03
SCNN1AP37088 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCNN1AP37088 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCNN1AP37088 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.49■■□□□ 1.03
SCNN1AP37088 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SCNN1AP37088 AC069236.1-201ENST00000604339 616 ntBASIC21.49■■□□□ 1.03
SCNN1AP37088 OR10C1-204ENST00000622521 1039 ntBASIC21.49■■□□□ 1.03
SCNN1AP37088 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCNN1AP37088 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SCNN1AP37088 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.49■■□□□ 1.03
SCNN1AP37088 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SCNN1AP37088 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.48■■□□□ 1.03
SCNN1AP37088 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SCNN1AP37088 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCNN1AP37088 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.48■■□□□ 1.03
SCNN1AP37088 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCNN1AP37088 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCNN1AP37088 AC026185.1-201ENST00000445748 174 ntBASIC21.48■■□□□ 1.03
SCNN1AP37088 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.48■■□□□ 1.03
SCNN1AP37088 AC005181.1-201ENST00000604782 1256 ntBASIC21.48■■□□□ 1.03
SCNN1AP37088 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
SCNN1AP37088 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.48■■□□□ 1.03
SCNN1AP37088 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCNN1AP37088 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.48■■□□□ 1.03
SCNN1AP37088 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCNN1AP37088 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.47■■□□□ 1.03
SCNN1AP37088 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SCNN1AP37088 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.47■■□□□ 1.03
SCNN1AP37088 CYP21A1P-202ENST00000354927 1481 ntBASIC21.47■■□□□ 1.03
SCNN1AP37088 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
SCNN1AP37088 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
SCNN1AP37088 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCNN1AP37088 PGM5P4-201ENST00000421970 445 ntBASIC21.47■■□□□ 1.03
SCNN1AP37088 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms