Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
RPA3P35244 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.81■□□□□ 0.92
RPA3P35244 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RPA3P35244 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.8■□□□□ 0.92
RPA3P35244 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
RPA3P35244 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.8■□□□□ 0.92
RPA3P35244 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.8■□□□□ 0.92
RPA3P35244 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.8■□□□□ 0.92
RPA3P35244 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.8■□□□□ 0.92
RPA3P35244 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.8■□□□□ 0.92
RPA3P35244 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.8■□□□□ 0.92
RPA3P35244 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.8■□□□□ 0.92
RPA3P35244 AL512408.1-201ENST00000569378 2000 ntBASIC20.8■□□□□ 0.92
RPA3P35244 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RPA3P35244 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.8■□□□□ 0.92
RPA3P35244 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.8■□□□□ 0.92
RPA3P35244 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPA3P35244 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.8■□□□□ 0.92
RPA3P35244 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.79■□□□□ 0.92
RPA3P35244 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 BX005040.4-201ENST00000637145 1518 ntBASIC20.79■□□□□ 0.92
RPA3P35244 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.79■□□□□ 0.92
RPA3P35244 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.79■□□□□ 0.92
RPA3P35244 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RPA3P35244 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.79■□□□□ 0.92
RPA3P35244 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.79■□□□□ 0.92
RPA3P35244 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPA3P35244 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.78■□□□□ 0.92
RPA3P35244 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPA3P35244 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 AL162377.1-201ENST00000618844 1793 ntBASIC20.78■□□□□ 0.92
RPA3P35244 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.78■□□□□ 0.92
RPA3P35244 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.78■□□□□ 0.92
RPA3P35244 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.78■□□□□ 0.92
RPA3P35244 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.78■□□□□ 0.92
RPA3P35244 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.78■□□□□ 0.92
RPA3P35244 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RPA3P35244 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.78■□□□□ 0.92
RPA3P35244 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPA3P35244 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPA3P35244 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPA3P35244 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
RPA3P35244 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.77■□□□□ 0.92
RPA3P35244 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.77■□□□□ 0.92
RPA3P35244 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RPA3P35244 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
RPA3P35244 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.77■□□□□ 0.92
RPA3P35244 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPA3P35244 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPA3P35244 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPA3P35244 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPA3P35244 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPA3P35244 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.77■□□□□ 0.91
RPA3P35244 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
RPA3P35244 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.77■□□□□ 0.91
RPA3P35244 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPA3P35244 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPA3P35244 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.76■□□□□ 0.91
RPA3P35244 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.76■□□□□ 0.91
RPA3P35244 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPA3P35244 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPA3P35244 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPA3P35244 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RPA3P35244 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RPA3P35244 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPA3P35244 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.76■□□□□ 0.91
RPA3P35244 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.76■□□□□ 0.91
RPA3P35244 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.76■□□□□ 0.91
RPA3P35244 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.76■□□□□ 0.91
RPA3P35244 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.76■□□□□ 0.91
RPA3P35244 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPA3P35244 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPA3P35244 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms