Protein–RNA interactions for Protein: P33400

RIM101, pH-response transcription factor pacC/RIM101, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIM101P33400 RDH54YBR073W 2877 nt6.09□□□□□ -1.43
RIM101P33400 PAU23YLR037C 375 nt6.09□□□□□ -1.43
RIM101P33400 CCW14YLR390W-A 717 nt6.09□□□□□ -1.43
RIM101P33400 YNL103W-AYNL103W-A 90 nt6.09□□□□□ -1.43
RIM101P33400 YOR015WYOR015W 360 nt6.09□□□□□ -1.43
RIM101P33400 CDC45YLR103C 1953 nt6.09□□□□□ -1.43
RIM101P33400 AVT1YJR001W 1809 nt6.09□□□□□ -1.44
RIM101P33400 CYM1YDR430C 2970 nt6.08□□□□□ -1.44
RIM101P33400 MNR2YKL064W 2910 nt6.08□□□□□ -1.44
RIM101P33400 PKC1YBL105C 3456 nt6.08□□□□□ -1.44
RIM101P33400 CWH41YGL027C 2502 nt6.08□□□□□ -1.44
RIM101P33400 NNK1YKL171W 2787 nt6.08□□□□□ -1.44
RIM101P33400 VPS1YKR001C 2115 nt6.08□□□□□ -1.44
RIM101P33400 YER077CYER077C 2067 nt6.08□□□□□ -1.44
RIM101P33400 SEC5YDR166C 2916 nt6.07□□□□□ -1.44
RIM101P33400 FRE3YOR381W 2136 nt6.07□□□□□ -1.44
RIM101P33400 YHR213W-BYHR213W-B 300 nt6.07□□□□□ -1.44
RIM101P33400 YAR064WYAR064W 300 nt6.07□□□□□ -1.44
RIM101P33400 YNL097W-AYNL097W-A 156 nt6.07□□□□□ -1.44
RIM101P33400 HHF1YBR009C 312 nt6.07□□□□□ -1.44
RIM101P33400 YAP1YML007W 1953 nt6.07□□□□□ -1.44
RIM101P33400 QDR3YBR043C 2070 nt6.06□□□□□ -1.44
RIM101P33400 SWA2YDR320C 2007 nt6.06□□□□□ -1.44
RIM101P33400 PMP2YEL017C-A 132 nt6.06□□□□□ -1.44
RIM101P33400 YEL077CYEL077C 3834 nt6.06□□□□□ -1.44
RIM101P33400 SUP2tY(GUA)D 75 nt6.06□□□□□ -1.44
RIM101P33400 SUP11tY(GUA)F1 75 nt6.06□□□□□ -1.44
RIM101P33400 SUP6tY(GUA)F2 75 nt6.06□□□□□ -1.44
RIM101P33400 SUP7tY(GUA)J1 75 nt6.06□□□□□ -1.44
RIM101P33400 SUP4tY(GUA)J2 75 nt6.06□□□□□ -1.44
RIM101P33400 SUP5tY(GUA)M1 75 nt6.06□□□□□ -1.44
RIM101P33400 SUP8tY(GUA)M2 75 nt6.06□□□□□ -1.44
RIM101P33400 SUP3tY(GUA)O 75 nt6.06□□□□□ -1.44
RIM101P33400 YOR314W-AYOR314W-A 111 nt6.06□□□□□ -1.44
RIM101P33400 JHD2YJR119C 2187 nt6.06□□□□□ -1.44
RIM101P33400 VID30YGL227W 2877 nt6.05□□□□□ -1.44
RIM101P33400 THI21YPL258C 1656 nt6.05□□□□□ -1.44
RIM101P33400 CHL1YPL008W 2586 nt6.05□□□□□ -1.44
RIM101P33400 NPC2YDL046W 522 nt6.05□□□□□ -1.44
RIM101P33400 RPS17AYML024W 411 nt6.05□□□□□ -1.44
RIM101P33400 SAR1YPL218W 573 nt6.05□□□□□ -1.44
RIM101P33400 TRM44YPL030W 1704 nt6.05□□□□□ -1.44
RIM101P33400 SSY1YDR160W 2559 nt6.05□□□□□ -1.44
RIM101P33400 VIP1YLR410W 3441 nt6.04□□□□□ -1.44
RIM101P33400 YDR003W-AYDR003W-A 123 nt6.04□□□□□ -1.44
RIM101P33400 YML057C-AYML057C-A 390 nt6.04□□□□□ -1.44
RIM101P33400 ECM16YMR128W 3804 nt6.04□□□□□ -1.44
RIM101P33400 PHM7YOL084W 2976 nt6.03□□□□□ -1.44
RIM101P33400 RPS29BYDL061C 171 nt6.03□□□□□ -1.44
RIM101P33400 SAE3YHR079C-A 276 nt6.03□□□□□ -1.44
RIM101P33400 PAN6YIL145C 930 nt6.03□□□□□ -1.44
RIM101P33400 YLR346CYLR346C 306 nt6.03□□□□□ -1.44
RIM101P33400 ISU1YPL135W 498 nt6.03□□□□□ -1.44
RIM101P33400 ELP2YGR200C 2367 nt6.03□□□□□ -1.44
RIM101P33400 YSH1YLR277C 2340 nt6.03□□□□□ -1.44
RIM101P33400 PDE2YOR360C 1581 nt6.02□□□□□ -1.45
RIM101P33400 USE1YGL098W 738 nt6.02□□□□□ -1.45
RIM101P33400 YIL142C-AYIL142C-A 333 nt6.02□□□□□ -1.45
RIM101P33400 SRL3YKR091W 741 nt6.02□□□□□ -1.45
RIM101P33400 FEX2YPL279C 1128 nt6.02□□□□□ -1.45
RIM101P33400 YBR131C-AYBR131C-A 90 nt6.02□□□□□ -1.45
RIM101P33400 DSF1YEL070W 1509 nt6.02□□□□□ -1.45
RIM101P33400 GYP7YDL234C 2241 nt6.02□□□□□ -1.45
RIM101P33400 CWC22YGR278W 1734 nt6.02□□□□□ -1.45
RIM101P33400 ALR2YFL050C 2577 nt6.02□□□□□ -1.45
RIM101P33400 ROK1YGL171W 1695 nt6.01□□□□□ -1.45
RIM101P33400 TSA2YDR453C 591 nt6.01□□□□□ -1.45
RIM101P33400 YGL074CYGL074C 327 nt6.01□□□□□ -1.45
RIM101P33400 SSY5YJL156C 2100 nt6.01□□□□□ -1.45
RIM101P33400 NAM2YLR382C 2685 nt6.01□□□□□ -1.45
RIM101P33400 HDA3YPR179C 1968 nt6□□□□□ -1.45
RIM101P33400 RPS18BYML026C 441 nt6□□□□□ -1.45
RIM101P33400 PDS5YMR076C 3834 nt6□□□□□ -1.45
RIM101P33400 PRM15YMR278W 1869 nt6□□□□□ -1.45
RIM101P33400 CCT8YJL008C 1707 nt5.99□□□□□ -1.45
RIM101P33400 tR(ACG)DtR(ACG)D 73 nt5.99□□□□□ -1.45
RIM101P33400 tR(ACG)EtR(ACG)E 73 nt5.99□□□□□ -1.45
RIM101P33400 tR(ACG)KtR(ACG)K 73 nt5.99□□□□□ -1.45
RIM101P33400 tR(ACG)LtR(ACG)L 73 nt5.99□□□□□ -1.45
RIM101P33400 tR(ACG)OtR(ACG)O 73 nt5.99□□□□□ -1.45
RIM101P33400 YIL166CYIL166C 1629 nt5.99□□□□□ -1.45
RIM101P33400 ARG5,6YER069W 2592 nt5.99□□□□□ -1.45
RIM101P33400 LCB5YLR260W 2064 nt5.98□□□□□ -1.45
RIM101P33400 HPC2YBR215W 1878 nt5.98□□□□□ -1.45
RIM101P33400 MSR1YHR091C 1932 nt5.98□□□□□ -1.45
RIM101P33400 RAT1YOR048C 3021 nt5.98□□□□□ -1.45
RIM101P33400 MOG1YJR074W 657 nt5.98□□□□□ -1.45
RIM101P33400 AFT1YGL071W 2073 nt5.98□□□□□ -1.45
RIM101P33400 KIP3YGL216W 2418 nt5.98□□□□□ -1.45
RIM101P33400 GRC3YLL035W 1899 nt5.98□□□□□ -1.45
RIM101P33400 LCD1YDR499W 2244 nt5.97□□□□□ -1.45
RIM101P33400 snR61snR61 90 nt5.97□□□□□ -1.45
RIM101P33400 YEL073CYEL073C 324 nt5.97□□□□□ -1.45
RIM101P33400 GOT1YMR292W 417 nt5.97□□□□□ -1.45
RIM101P33400 ACC1YNR016C 6702 nt5.97□□□□□ -1.45
RIM101P33400 TPO2YGR138C 1845 nt5.97□□□□□ -1.45
RIM101P33400 SNF3YDL194W 2655 nt5.96□□□□□ -1.45
RIM101P33400 OCA5YHL029C 2040 nt5.96□□□□□ -1.45
RIM101P33400 YNR042WYNR042W 429 nt5.96□□□□□ -1.46
RIM101P33400 SGF11YPL047W 300 nt5.96□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 97.8 ms