Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN6P29350 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.57■□□□□ 0.72
PTPN6P29350 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN6P29350 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PTPN6P29350 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN6P29350 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN6P29350 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN6P29350 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN6P29350 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.57■□□□□ 0.72
PTPN6P29350 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN6P29350 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PTPN6P29350 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTPN6P29350 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.57■□□□□ 0.72
PTPN6P29350 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTPN6P29350 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN6P29350 AC011484.1-201ENST00000377652 1995 ntBASIC19.56■□□□□ 0.72
PTPN6P29350 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.56■□□□□ 0.72
PTPN6P29350 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN6P29350 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.56■□□□□ 0.72
PTPN6P29350 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.56■□□□□ 0.72
PTPN6P29350 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PTPN6P29350 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.56■□□□□ 0.72
PTPN6P29350 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN6P29350 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN6P29350 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN6P29350 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTPN6P29350 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.56■□□□□ 0.72
PTPN6P29350 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN6P29350 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PTPN6P29350 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PTPN6P29350 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PTPN6P29350 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPN6P29350 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.55■□□□□ 0.72
PTPN6P29350 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.55■□□□□ 0.72
PTPN6P29350 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PTPN6P29350 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN6P29350 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.55■□□□□ 0.72
PTPN6P29350 AL391422.3-201ENST00000603791 2761 ntBASIC19.55■□□□□ 0.72
PTPN6P29350 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
PTPN6P29350 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
PTPN6P29350 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN6P29350 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PTPN6P29350 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PTPN6P29350 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN6P29350 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN6P29350 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.54■□□□□ 0.72
PTPN6P29350 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPN6P29350 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PTPN6P29350 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN6P29350 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 AL512408.1-201ENST00000569378 2000 ntBASIC19.53■□□□□ 0.72
PTPN6P29350 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PTPN6P29350 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PTPN6P29350 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPN6P29350 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.53■□□□□ 0.72
PTPN6P29350 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 NTF6G-201ENST00000591094 616 ntBASIC19.53■□□□□ 0.72
PTPN6P29350 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN6P29350 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PTPN6P29350 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms