Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
ABCD3P28288 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCD3P28288 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCD3P28288 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCD3P28288 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCD3P28288 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
ABCD3P28288 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCD3P28288 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCD3P28288 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCD3P28288 AC133552.2-202ENST00000575694 574 ntBASIC19.01■□□□□ 0.63
ABCD3P28288 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.01■□□□□ 0.63
ABCD3P28288 OR10C1-204ENST00000622521 1039 ntBASIC19.01■□□□□ 0.63
ABCD3P28288 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCD3P28288 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
ABCD3P28288 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCD3P28288 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCD3P28288 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ABCD3P28288 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.01■□□□□ 0.63
ABCD3P28288 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ABCD3P28288 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 AC121338.2-201ENST00000622535 1744 ntBASIC19■□□□□ 0.63
ABCD3P28288 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19■□□□□ 0.63
ABCD3P28288 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ABCD3P28288 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19■□□□□ 0.63
ABCD3P28288 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19■□□□□ 0.63
ABCD3P28288 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19■□□□□ 0.63
ABCD3P28288 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 PKD1P6-201ENST00000343738 4769 ntBASIC19■□□□□ 0.63
ABCD3P28288 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19■□□□□ 0.63
ABCD3P28288 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19■□□□□ 0.63
ABCD3P28288 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ABCD3P28288 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCD3P28288 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ABCD3P28288 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
ABCD3P28288 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ABCD3P28288 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 NCF1B-203ENST00000435988 1254 ntBASIC18.99■□□□□ 0.63
ABCD3P28288 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCD3P28288 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCD3P28288 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.99■□□□□ 0.63
ABCD3P28288 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.99■□□□□ 0.63
ABCD3P28288 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCD3P28288 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ABCD3P28288 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.99■□□□□ 0.63
ABCD3P28288 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.98■□□□□ 0.63
ABCD3P28288 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCD3P28288 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.98■□□□□ 0.63
ABCD3P28288 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ABCD3P28288 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.98■□□□□ 0.63
ABCD3P28288 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCD3P28288 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
ABCD3P28288 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCD3P28288 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.98■□□□□ 0.63
ABCD3P28288 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.98■□□□□ 0.63
ABCD3P28288 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.98■□□□□ 0.63
ABCD3P28288 AF201337.1-201ENST00000520239 748 ntBASIC18.98■□□□□ 0.63
ABCD3P28288 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.98■□□□□ 0.63
ABCD3P28288 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.98■□□□□ 0.63
ABCD3P28288 AL121832.2-201ENST00000610979 668 ntBASIC18.98■□□□□ 0.63
ABCD3P28288 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.98■□□□□ 0.63
ABCD3P28288 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCD3P28288 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCD3P28288 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
ABCD3P28288 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ABCD3P28288 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCD3P28288 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ABCD3P28288 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ABCD3P28288 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ABCD3P28288 PLK5-205ENST00000642079 1969 ntBASIC18.97■□□□□ 0.63
ABCD3P28288 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ABCD3P28288 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ABCD3P28288 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
ABCD3P28288 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.97■□□□□ 0.63
ABCD3P28288 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ABCD3P28288 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.97■□□□□ 0.63
ABCD3P28288 AC083906.2-201ENST00000511578 360 ntBASIC18.97■□□□□ 0.63
ABCD3P28288 AC105036.2-201ENST00000569468 176 ntBASIC18.97■□□□□ 0.63
ABCD3P28288 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.97■□□□□ 0.63
ABCD3P28288 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.97■□□□□ 0.63
ABCD3P28288 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.97■□□□□ 0.63
ABCD3P28288 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
ABCD3P28288 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.97■□□□□ 0.63
ABCD3P28288 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ABCD3P28288 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms