Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 AC010141.3-201ENST00000456659 717 ntBASIC16.49■□□□□ 0.23
ATP6V0CP27449 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ATP6V0CP27449 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ATP6V0CP27449 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0CP27449 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0CP27449 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0CP27449 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0CP27449 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0CP27449 AL158211.5-201ENST00000623583 2518 ntBASIC16.48■□□□□ 0.23
ATP6V0CP27449 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ATP6V0CP27449 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP6V0CP27449 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 AC021242.3-201ENST00000607598 1377 ntBASIC16.47■□□□□ 0.23
ATP6V0CP27449 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP6V0CP27449 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP6V0CP27449 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 AC125437.2-201ENST00000625180 2167 ntBASIC16.46■□□□□ 0.23
ATP6V0CP27449 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP6V0CP27449 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATP6V0CP27449 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ATP6V0CP27449 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP6V0CP27449 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ATP6V0CP27449 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATP6V0CP27449 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATP6V0CP27449 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ATP6V0CP27449 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.46■□□□□ 0.22
ATP6V0CP27449 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0CP27449 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0CP27449 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0CP27449 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0CP27449 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0CP27449 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0CP27449 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0CP27449 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.45■□□□□ 0.22
ATP6V0CP27449 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ATP6V0CP27449 AP006587.3-201ENST00000525742 1516 ntBASIC16.45■□□□□ 0.22
ATP6V0CP27449 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ATP6V0CP27449 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms