Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL1P22362 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCL1P22362 AC104187.1-201ENST00000607510 612 ntBASIC17.78■□□□□ 0.44
CCL1P22362 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL1P22362 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL1P22362 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL1P22362 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.78■□□□□ 0.44
CCL1P22362 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL1P22362 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.78■□□□□ 0.44
CCL1P22362 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL1P22362 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL1P22362 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.77■□□□□ 0.44
CCL1P22362 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCL1P22362 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL1P22362 MIR638-201ENST00000385237 100 ntBASIC17.77■□□□□ 0.44
CCL1P22362 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.77■□□□□ 0.44
CCL1P22362 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.77■□□□□ 0.44
CCL1P22362 KRT18P20-201ENST00000548986 1279 ntBASIC17.77■□□□□ 0.44
CCL1P22362 CCDC92B-201ENST00000575506 885 ntBASIC17.77■□□□□ 0.44
CCL1P22362 AP001160.3-201ENST00000601484 763 ntBASIC17.77■□□□□ 0.44
CCL1P22362 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCL1P22362 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCL1P22362 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL1P22362 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL1P22362 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
CCL1P22362 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL1P22362 AL121603.2-201ENST00000557373 2117 ntBASIC17.77■□□□□ 0.43
CCL1P22362 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
CCL1P22362 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL1P22362 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL1P22362 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCL1P22362 AC116050.2-201ENST00000612102 1779 ntBASIC17.76■□□□□ 0.43
CCL1P22362 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CCL1P22362 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.76■□□□□ 0.43
CCL1P22362 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCL1P22362 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.76■□□□□ 0.43
CCL1P22362 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CCL1P22362 YBX1P1-201ENST00000445822 960 ntBASIC17.76■□□□□ 0.43
CCL1P22362 SLC7A5P2-201ENST00000553010 536 ntBASIC17.76■□□□□ 0.43
CCL1P22362 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCL1P22362 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.76■□□□□ 0.43
CCL1P22362 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CCL1P22362 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL1P22362 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.75■□□□□ 0.43
CCL1P22362 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 AC092720.2-201ENST00000602388 1665 ntBASIC17.75■□□□□ 0.43
CCL1P22362 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCL1P22362 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.75■□□□□ 0.43
CCL1P22362 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.75■□□□□ 0.43
CCL1P22362 MIR2861-201ENST00000636310 90 ntBASIC17.75■□□□□ 0.43
CCL1P22362 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.75■□□□□ 0.43
CCL1P22362 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.75■□□□□ 0.43
CCL1P22362 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCL1P22362 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCL1P22362 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.75■□□□□ 0.43
CCL1P22362 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.75■□□□□ 0.43
CCL1P22362 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
CCL1P22362 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.74■□□□□ 0.43
CCL1P22362 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL1P22362 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL1P22362 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCL1P22362 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCL1P22362 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL1P22362 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.74■□□□□ 0.43
CCL1P22362 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.74■□□□□ 0.43
CCL1P22362 AC243732.1-201ENST00000612648 864 ntBASIC17.74■□□□□ 0.43
CCL1P22362 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL1P22362 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL1P22362 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL1P22362 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCL1P22362 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL1P22362 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
CCL1P22362 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL1P22362 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL1P22362 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL1P22362 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL1P22362 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL1P22362 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL1P22362 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCL1P22362 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms