Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN3P20807 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CAPN3P20807 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN3P20807 FP700111.2-201ENST00000619190 1892 ntBASIC19.82■□□□□ 0.76
CAPN3P20807 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.82■□□□□ 0.76
CAPN3P20807 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.82■□□□□ 0.76
CAPN3P20807 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.82■□□□□ 0.76
CAPN3P20807 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.82■□□□□ 0.76
CAPN3P20807 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.82■□□□□ 0.76
CAPN3P20807 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN3P20807 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN3P20807 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN3P20807 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
CAPN3P20807 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPN3P20807 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN3P20807 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.81■□□□□ 0.76
CAPN3P20807 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.81■□□□□ 0.76
CAPN3P20807 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN3P20807 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN3P20807 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN3P20807 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPN3P20807 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPN3P20807 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN3P20807 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN3P20807 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.8■□□□□ 0.76
CAPN3P20807 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.8■□□□□ 0.76
CAPN3P20807 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN3P20807 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPN3P20807 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.8■□□□□ 0.76
CAPN3P20807 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN3P20807 KRT18P5-201ENST00000436075 1291 ntBASIC19.8■□□□□ 0.76
CAPN3P20807 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CAPN3P20807 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN3P20807 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPN3P20807 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.8■□□□□ 0.76
CAPN3P20807 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CAPN3P20807 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CAPN3P20807 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN3P20807 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN3P20807 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN3P20807 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPN3P20807 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CAPN3P20807 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CAPN3P20807 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN3P20807 AC233992.3-201ENST00000607491 485 ntBASIC19.79■□□□□ 0.76
CAPN3P20807 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.79■□□□□ 0.76
CAPN3P20807 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN3P20807 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CAPN3P20807 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN3P20807 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN3P20807 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN3P20807 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPN3P20807 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN3P20807 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN3P20807 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN3P20807 AC005224.4-201ENST00000583262 1652 ntBASIC19.78■□□□□ 0.76
CAPN3P20807 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CAPN3P20807 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN3P20807 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN3P20807 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN3P20807 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN3P20807 YBX1P1-201ENST00000445822 960 ntBASIC19.78■□□□□ 0.76
CAPN3P20807 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN3P20807 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.78■□□□□ 0.76
CAPN3P20807 IGHV3-19-201ENST00000521488 291 ntBASIC19.78■□□□□ 0.76
CAPN3P20807 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN3P20807 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPN3P20807 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.78■□□□□ 0.76
CAPN3P20807 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN3P20807 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN3P20807 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPN3P20807 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CAPN3P20807 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CAPN3P20807 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN3P20807 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN3P20807 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN3P20807 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.77■□□□□ 0.76
CAPN3P20807 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.77■□□□□ 0.76
CAPN3P20807 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN3P20807 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.77■□□□□ 0.76
CAPN3P20807 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN3P20807 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CAPN3P20807 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms