Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.69■□□□□ 0.58
CD53P19397 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD53P19397 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.68■□□□□ 0.58
CD53P19397 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.68■□□□□ 0.58
CD53P19397 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
CD53P19397 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CD53P19397 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CD53P19397 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CD53P19397 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.68■□□□□ 0.58
CD53P19397 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.68■□□□□ 0.58
CD53P19397 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.68■□□□□ 0.58
CD53P19397 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.68■□□□□ 0.58
CD53P19397 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.68■□□□□ 0.58
CD53P19397 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD53P19397 AP005212.1-201ENST00000581547 1997 ntBASIC18.68■□□□□ 0.58
CD53P19397 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CD53P19397 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.67■□□□□ 0.58
CD53P19397 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CD53P19397 MIR663A-201ENST00000385250 93 ntBASIC18.67■□□□□ 0.58
CD53P19397 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.67■□□□□ 0.58
CD53P19397 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.67■□□□□ 0.58
CD53P19397 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.67■□□□□ 0.58
CD53P19397 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CD53P19397 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CD53P19397 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CD53P19397 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.67■□□□□ 0.58
CD53P19397 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.66■□□□□ 0.58
CD53P19397 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CD53P19397 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 GPX1P1-201ENST00000388829 606 ntBASIC18.66■□□□□ 0.58
CD53P19397 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.66■□□□□ 0.58
CD53P19397 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.66■□□□□ 0.58
CD53P19397 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.66■□□□□ 0.58
CD53P19397 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.66■□□□□ 0.58
CD53P19397 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.66■□□□□ 0.58
CD53P19397 TMEM191A-211ENST00000637163 1067 ntBASIC18.66■□□□□ 0.58
CD53P19397 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.66■□□□□ 0.58
CD53P19397 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.66■□□□□ 0.58
CD53P19397 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CD53P19397 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CD53P19397 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.66■□□□□ 0.58
CD53P19397 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CD53P19397 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.65■□□□□ 0.58
CD53P19397 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.65■□□□□ 0.58
CD53P19397 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CD53P19397 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CD53P19397 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.65■□□□□ 0.58
CD53P19397 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.65■□□□□ 0.58
CD53P19397 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.65■□□□□ 0.58
CD53P19397 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.65■□□□□ 0.58
CD53P19397 SMUG1P1-201ENST00000590640 811 ntBASIC18.65■□□□□ 0.58
CD53P19397 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 AC006128.1-201ENST00000624704 1661 ntBASIC18.65■□□□□ 0.58
CD53P19397 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.65■□□□□ 0.58
CD53P19397 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CD53P19397 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CD53P19397 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms