Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.09■□□□□ 0.49
ATF1P18846 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.09■□□□□ 0.49
ATF1P18846 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATF1P18846 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATF1P18846 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATF1P18846 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.08■□□□□ 0.49
ATF1P18846 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.08■□□□□ 0.49
ATF1P18846 AC008406.3-201ENST00000620001 1374 ntBASIC18.08■□□□□ 0.49
ATF1P18846 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
ATF1P18846 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 AC099791.1-201ENST00000416440 715 ntBASIC18.08■□□□□ 0.48
ATF1P18846 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ATF1P18846 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.08■□□□□ 0.48
ATF1P18846 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.08■□□□□ 0.48
ATF1P18846 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF1P18846 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.08■□□□□ 0.48
ATF1P18846 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF1P18846 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF1P18846 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF1P18846 AC105233.4-201ENST00000642045 216 ntBASIC18.08■□□□□ 0.48
ATF1P18846 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF1P18846 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF1P18846 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.08■□□□□ 0.48
ATF1P18846 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.08■□□□□ 0.48
ATF1P18846 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATF1P18846 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.07■□□□□ 0.48
ATF1P18846 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
ATF1P18846 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATF1P18846 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ATF1P18846 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
ATF1P18846 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.07■□□□□ 0.48
ATF1P18846 AC096631.2-201ENST00000436136 790 ntBASIC18.07■□□□□ 0.48
ATF1P18846 PBX2P1-201ENST00000493219 1291 ntBASIC18.07■□□□□ 0.48
ATF1P18846 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.07■□□□□ 0.48
ATF1P18846 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.07■□□□□ 0.48
ATF1P18846 AC099778.1-201ENST00000568593 1911 ntBASIC18.07■□□□□ 0.48
ATF1P18846 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATF1P18846 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATF1P18846 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.06■□□□□ 0.48
ATF1P18846 AC055733.4-201ENST00000638462 1354 ntBASIC18.06■□□□□ 0.48
ATF1P18846 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 TSPY26P-201ENST00000476365 1326 ntBASIC18.06■□□□□ 0.48
ATF1P18846 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATF1P18846 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.06■□□□□ 0.48
ATF1P18846 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
ATF1P18846 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.06■□□□□ 0.48
ATF1P18846 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.06■□□□□ 0.48
ATF1P18846 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ATF1P18846 AC027682.1-201ENST00000562846 899 ntBASIC18.06■□□□□ 0.48
ATF1P18846 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.06■□□□□ 0.48
ATF1P18846 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
ATF1P18846 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATF1P18846 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.05■□□□□ 0.48
ATF1P18846 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
ATF1P18846 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.05■□□□□ 0.48
ATF1P18846 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.05■□□□□ 0.48
ATF1P18846 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ATF1P18846 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.05■□□□□ 0.48
ATF1P18846 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.05■□□□□ 0.48
ATF1P18846 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
ATF1P18846 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ATF1P18846 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ATF1P18846 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ATF1P18846 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ATF1P18846 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
ATF1P18846 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATF1P18846 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ATF1P18846 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms