Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
COL11A2P13942 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.57■■□□□ 1.68
COL11A2P13942 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
COL11A2P13942 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
COL11A2P13942 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.56■■□□□ 1.68
COL11A2P13942 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.56■■□□□ 1.68
COL11A2P13942 AC097493.4-201ENST00000641197 219 ntBASIC25.56■■□□□ 1.68
COL11A2P13942 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.56■■□□□ 1.68
COL11A2P13942 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL11A2P13942 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL11A2P13942 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.55■■□□□ 1.68
COL11A2P13942 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.55■■□□□ 1.68
COL11A2P13942 AL445228.2-201ENST00000605589 952 ntBASIC25.55■■□□□ 1.68
COL11A2P13942 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL11A2P13942 AC116050.2-201ENST00000612102 1779 ntBASIC25.55■■□□□ 1.68
COL11A2P13942 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
COL11A2P13942 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
COL11A2P13942 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL11A2P13942 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.55■■□□□ 1.68
COL11A2P13942 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
COL11A2P13942 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.54■■□□□ 1.68
COL11A2P13942 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
COL11A2P13942 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.54■■□□□ 1.68
COL11A2P13942 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
COL11A2P13942 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL11A2P13942 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.54■■□□□ 1.68
COL11A2P13942 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC25.54■■□□□ 1.68
COL11A2P13942 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL11A2P13942 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
COL11A2P13942 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC25.53■■□□□ 1.68
COL11A2P13942 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
COL11A2P13942 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL11A2P13942 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.53■■□□□ 1.68
COL11A2P13942 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.53■■□□□ 1.68
COL11A2P13942 AL356652.1-201ENST00000615962 565 ntBASIC25.53■■□□□ 1.68
COL11A2P13942 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL11A2P13942 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.52■■□□□ 1.68
COL11A2P13942 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.52■■□□□ 1.68
COL11A2P13942 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL11A2P13942 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL11A2P13942 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL11A2P13942 RARRES2P10-201ENST00000564312 460 ntBASIC25.52■■□□□ 1.68
COL11A2P13942 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.52■■□□□ 1.68
COL11A2P13942 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
COL11A2P13942 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL11A2P13942 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
COL11A2P13942 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.52■■□□□ 1.68
COL11A2P13942 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
COL11A2P13942 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
COL11A2P13942 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC25.51■■□□□ 1.68
COL11A2P13942 AC005829.2-201ENST00000571422 1056 ntBASIC25.51■■□□□ 1.68
COL11A2P13942 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC25.51■■□□□ 1.68
COL11A2P13942 AC110285.5-201ENST00000611501 352 ntBASIC25.51■■□□□ 1.68
COL11A2P13942 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC25.51■■□□□ 1.67
COL11A2P13942 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
COL11A2P13942 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL11A2P13942 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL11A2P13942 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL11A2P13942 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.51■■□□□ 1.67
COL11A2P13942 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.51■■□□□ 1.67
COL11A2P13942 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC25.51■■□□□ 1.67
COL11A2P13942 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL11A2P13942 KRT17P2-201ENST00000300992 1314 ntBASIC25.51■■□□□ 1.67
COL11A2P13942 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.5■■□□□ 1.67
COL11A2P13942 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.5■■□□□ 1.67
COL11A2P13942 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.5■■□□□ 1.67
COL11A2P13942 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.5■■□□□ 1.67
COL11A2P13942 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.5■■□□□ 1.67
COL11A2P13942 C2orf69P4-201ENST00000565394 541 ntBASIC25.5■■□□□ 1.67
COL11A2P13942 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.5■■□□□ 1.67
COL11A2P13942 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC25.5■■□□□ 1.67
COL11A2P13942 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL11A2P13942 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.5■■□□□ 1.67
COL11A2P13942 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
COL11A2P13942 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.49■■□□□ 1.67
COL11A2P13942 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
COL11A2P13942 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL11A2P13942 AL353708.3-201ENST00000610272 989 ntBASIC25.49■■□□□ 1.67
COL11A2P13942 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC25.49■■□□□ 1.67
COL11A2P13942 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.49■■□□□ 1.67
COL11A2P13942 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
COL11A2P13942 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
COL11A2P13942 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms