Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNB1P11230 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNB1P11230 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNB1P11230 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNB1P11230 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CHRNB1P11230 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNB1P11230 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.98■□□□□ 0.95
CHRNB1P11230 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNB1P11230 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNB1P11230 AC010542.4-201ENST00000563151 1910 ntBASIC20.98■□□□□ 0.95
CHRNB1P11230 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.98■□□□□ 0.95
CHRNB1P11230 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.98■□□□□ 0.95
CHRNB1P11230 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.98■□□□□ 0.95
CHRNB1P11230 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.98■□□□□ 0.95
CHRNB1P11230 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNB1P11230 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CHRNB1P11230 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNB1P11230 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNB1P11230 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CHRNB1P11230 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.98■□□□□ 0.95
CHRNB1P11230 AC233702.5-201ENST00000584107 538 ntBASIC20.98■□□□□ 0.95
CHRNB1P11230 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHRNB1P11230 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.98■□□□□ 0.95
CHRNB1P11230 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHRNB1P11230 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CHRNB1P11230 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.97■□□□□ 0.95
CHRNB1P11230 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.97■□□□□ 0.95
CHRNB1P11230 AC012618.2-201ENST00000428058 849 ntBASIC20.97■□□□□ 0.95
CHRNB1P11230 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.97■□□□□ 0.95
CHRNB1P11230 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.97■□□□□ 0.95
CHRNB1P11230 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 LINC01023-201ENST00000606054 436 ntBASIC20.97■□□□□ 0.95
CHRNB1P11230 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.97■□□□□ 0.95
CHRNB1P11230 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHRNB1P11230 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CHRNB1P11230 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.97■□□□□ 0.95
CHRNB1P11230 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNB1P11230 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNB1P11230 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHRNB1P11230 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHRNB1P11230 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNB1P11230 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CHRNB1P11230 RPS2P55-201ENST00000397318 883 ntBASIC20.96■□□□□ 0.95
CHRNB1P11230 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNB1P11230 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNB1P11230 AC107956.1-201ENST00000494359 873 ntBASIC20.96■□□□□ 0.95
CHRNB1P11230 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHRNB1P11230 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNB1P11230 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNB1P11230 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CHRNB1P11230 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHRNB1P11230 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHRNB1P11230 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.96■□□□□ 0.95
CHRNB1P11230 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
CHRNB1P11230 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.95■□□□□ 0.95
CHRNB1P11230 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNB1P11230 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
CHRNB1P11230 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.95■□□□□ 0.94
CHRNB1P11230 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNB1P11230 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHRNB1P11230 BX088651.1-201ENST00000540551 451 ntBASIC20.95■□□□□ 0.94
CHRNB1P11230 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNB1P11230 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.95■□□□□ 0.94
CHRNB1P11230 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.95■□□□□ 0.94
CHRNB1P11230 MTDHP1-201ENST00000605323 784 ntBASIC20.95■□□□□ 0.94
CHRNB1P11230 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNB1P11230 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNB1P11230 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHRNB1P11230 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHRNB1P11230 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 C2orf69P4-201ENST00000565394 541 ntBASIC20.94■□□□□ 0.94
CHRNB1P11230 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRNB1P11230 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CHRNB1P11230 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHRNB1P11230 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.94■□□□□ 0.94
CHRNB1P11230 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHRNB1P11230 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHRNB1P11230 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.94■□□□□ 0.94
CHRNB1P11230 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNB1P11230 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNB1P11230 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHRNB1P11230 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms