Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC012414.1-201ENST00000556676 535 ntBASIC18.05■□□□□ 0.48
UBCP0CG48 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.05■□□□□ 0.48
UBCP0CG48 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.05■□□□□ 0.48
UBCP0CG48 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.05■□□□□ 0.48
UBCP0CG48 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.05■□□□□ 0.48
UBCP0CG48 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBCP0CG48 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBCP0CG48 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBCP0CG48 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
UBCP0CG48 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.05■□□□□ 0.48
UBCP0CG48 AC011484.1-201ENST00000377652 1995 ntBASIC18.04■□□□□ 0.48
UBCP0CG48 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.04■□□□□ 0.48
UBCP0CG48 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 AC020907.5-201ENST00000624372 1936 ntBASIC18.04■□□□□ 0.48
UBCP0CG48 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.04■□□□□ 0.48
UBCP0CG48 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.04■□□□□ 0.48
UBCP0CG48 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.04■□□□□ 0.48
UBCP0CG48 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 AF213884.3-201ENST00000563833 479 ntBASIC18.04■□□□□ 0.48
UBCP0CG48 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
UBCP0CG48 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.04■□□□□ 0.48
UBCP0CG48 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.04■□□□□ 0.48
UBCP0CG48 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBCP0CG48 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBCP0CG48 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBCP0CG48 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.03■□□□□ 0.48
UBCP0CG48 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBCP0CG48 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.03■□□□□ 0.48
UBCP0CG48 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.03■□□□□ 0.48
UBCP0CG48 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.03■□□□□ 0.48
UBCP0CG48 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.03■□□□□ 0.48
UBCP0CG48 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.03■□□□□ 0.48
UBCP0CG48 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.03■□□□□ 0.48
UBCP0CG48 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.03■□□□□ 0.48
UBCP0CG48 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBCP0CG48 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBCP0CG48 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
UBCP0CG48 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBCP0CG48 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBCP0CG48 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBCP0CG48 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.03■□□□□ 0.48
UBCP0CG48 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UBCP0CG48 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
UBCP0CG48 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.02■□□□□ 0.48
UBCP0CG48 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
UBCP0CG48 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBCP0CG48 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBCP0CG48 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.02■□□□□ 0.48
UBCP0CG48 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBCP0CG48 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBCP0CG48 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.02■□□□□ 0.48
UBCP0CG48 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.02■□□□□ 0.48
UBCP0CG48 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
UBCP0CG48 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBCP0CG48 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.02■□□□□ 0.48
UBCP0CG48 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.02■□□□□ 0.48
UBCP0CG48 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBCP0CG48 AL354811.1-201ENST00000610286 706 ntBASIC18.02■□□□□ 0.48
UBCP0CG48 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.02■□□□□ 0.48
UBCP0CG48 FP700111.2-201ENST00000619190 1892 ntBASIC18.02■□□□□ 0.48
UBCP0CG48 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.02■□□□□ 0.48
UBCP0CG48 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBCP0CG48 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBCP0CG48 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
UBCP0CG48 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBCP0CG48 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBCP0CG48 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.02■□□□□ 0.47
UBCP0CG48 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBCP0CG48 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBCP0CG48 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBCP0CG48 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.02■□□□□ 0.47
UBCP0CG48 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.01■□□□□ 0.47
UBCP0CG48 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.01■□□□□ 0.47
UBCP0CG48 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
UBCP0CG48 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.01■□□□□ 0.47
UBCP0CG48 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.01■□□□□ 0.47
UBCP0CG48 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.01■□□□□ 0.47
UBCP0CG48 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.01■□□□□ 0.47
UBCP0CG48 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.01■□□□□ 0.47
UBCP0CG48 AC008175.2-201ENST00000612840 297 ntBASIC18.01■□□□□ 0.47
UBCP0CG48 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBCP0CG48 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
UBCP0CG48 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
UBCP0CG48 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBCP0CG48 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms