Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YHC1YLR298C 696 nt2.92□□□□□ -1.94
TY2A-LR1P0C2J4 YPR050CYPR050C 414 nt2.92□□□□□ -1.94
TY2A-LR1P0C2J4 RPA190YOR341W 4995 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 YMR31YFR049W 372 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 TCD1YHR003C 1290 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 RPS21BYJL136C 264 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 RPL8BYLL045C 771 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 PAU23YLR037C 375 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 YLR171WYLR171W 390 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 ARV1YLR242C 966 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 HSP10YOR020C 321 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 RRD2YPL152W 1077 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 YAT2YER024W 2772 nt2.91□□□□□ -1.94
TY2A-LR1P0C2J4 SNF12YNR023W 1701 nt2.9□□□□□ -1.94
TY2A-LR1P0C2J4 FUS1YCL027W 1539 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 MRH1YDR033W 963 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 YER038W-AYER038W-A 381 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 RPL29YFR032C-A 180 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 DLS1YJL065C 504 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 YJL127C-BYJL127C-B 159 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 RPS28BYLR264W 204 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 CTK3YML112W 891 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 LSM2YBL026W 288 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 YNL324WYNL324W 396 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 YPL080CYPL080C 327 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 NPR1YNL183C 2373 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 COG3YER157W 2406 nt2.9□□□□□ -1.95
TY2A-LR1P0C2J4 YLR001CYLR001C 2589 nt2.89□□□□□ -1.95
TY2A-LR1P0C2J4 YDR193WYDR193W 399 nt2.89□□□□□ -1.95
TY2A-LR1P0C2J4 TIM11YDR322C-A 291 nt2.89□□□□□ -1.95
TY2A-LR1P0C2J4 RAD6YGL058W 519 nt2.89□□□□□ -1.95
TY2A-LR1P0C2J4 YHL006W-AYHL006W-A 354 nt2.89□□□□□ -1.95
TY2A-LR1P0C2J4 YIL175WYIL175W 318 nt2.89□□□□□ -1.95
TY2A-LR1P0C2J4 YJL222W-BYJL222W-B 138 nt2.89□□□□□ -1.95
TY2A-LR1P0C2J4 RRT1YBL048W 312 nt2.89□□□□□ -1.95
TY2A-LR1P0C2J4 SPB1YCL054W 2526 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 VAC8YEL013W 1737 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 APC2YLR127C 2562 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 TIF35YDR429C 825 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 YER119C-AYER119C-A 372 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 BI2Q0110 1272 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 YGR107WYGR107W 450 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 BIG1YHR101C 1008 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 YIL054WYIL054W 318 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 RPI1YIL119C 1224 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 YNR021WYNR021W 1215 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 PEP12YOR036W 867 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 ISU1YPL135W 498 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 YBR076C-AYBR076C-A 267 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 SPO14YKR031C 5052 nt2.88□□□□□ -1.95
TY2A-LR1P0C2J4 NET1YJL076W 3570 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 MAK21YDR060W 3078 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 RGR1YLR071C 3249 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 RMT2YDR465C 1239 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 YGR042WYGR042W 816 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 YHL005CYHL005C 393 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 YMR052C-AYMR052C-A 366 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 YNL046WYNL046W 519 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 RHO5YNL180C 996 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 RGC1YPR115W 3252 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 TRM2YKR056W 1920 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 DBP10YDL031W 2988 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 DOA4YDR069C 2781 nt2.87□□□□□ -1.95
TY2A-LR1P0C2J4 RLF2YPR018W 1821 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 HAA1YPR008W 2085 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 NMD2YHR077C 3270 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 TSC11YER093C 4293 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 HMLALPHA2YCL067C 633 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 MATALPHA2YCR039C 633 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 tF(GAA)DtF(GAA)D 73 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 tF(GAA)NtF(GAA)N 73 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 YER165C-AYER165C-A 357 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 YLR230WYLR230W 306 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 YLR297WYLR297W 390 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 NSL1YPL233W 651 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 RPN1YHR027C 2982 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 STT4YLR305C 5703 nt2.86□□□□□ -1.95
TY2A-LR1P0C2J4 TSA2YDR453C 591 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 YER084W-AYER084W-A 513 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 DDR48YMR173W 1293 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 YMR316C-AYMR316C-A 312 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 NOP15YNL110C 663 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 TOM22YNL131W 459 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 YPL039WYPL039W 951 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 UTP13YLR222C 2454 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 TCP1YDR212W 1680 nt2.85□□□□□ -1.95
TY2A-LR1P0C2J4 BUD4YJR092W 4344 nt2.84□□□□□ -1.95
TY2A-LR1P0C2J4 RPS17BYDR447C 411 nt2.84□□□□□ -1.95
TY2A-LR1P0C2J4 FYV4YHR059W 393 nt2.84□□□□□ -1.95
TY2A-LR1P0C2J4 YKL063CYKL063C 504 nt2.84□□□□□ -1.95
TY2A-LR1P0C2J4 YKL068W-AYKL068W-A 237 nt2.84□□□□□ -1.95
TY2A-LR1P0C2J4 RPB5YBR154C 648 nt2.84□□□□□ -1.95
TY2A-LR1P0C2J4 YDL180WYDL180W 1644 nt2.83□□□□□ -1.96
TY2A-LR1P0C2J4 PSY2YNL201C 2577 nt2.83□□□□□ -1.96
TY2A-LR1P0C2J4 PPH3YDR075W 927 nt2.83□□□□□ -1.96
TY2A-LR1P0C2J4 ECL1YGR146C 636 nt2.83□□□□□ -1.96
TY2A-LR1P0C2J4 RTS3YGR161C 792 nt2.83□□□□□ -1.96
TY2A-LR1P0C2J4 LAG1YHL003C 1236 nt2.83□□□□□ -1.96
TY2A-LR1P0C2J4 SDH3YKL141W 597 nt2.83□□□□□ -1.96
TY2A-LR1P0C2J4 UNG1YML021C 1080 nt2.83□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 79.5 ms