Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SNRNP200O75643 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.8■□□□□ 0.76
SNRNP200O75643 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SNRNP200O75643 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.8■□□□□ 0.76
SNRNP200O75643 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.8■□□□□ 0.76
SNRNP200O75643 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SNRNP200O75643 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
SNRNP200O75643 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.8■□□□□ 0.76
SNRNP200O75643 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNRNP200O75643 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 AC073210.2-201ENST00000430369 194 ntBASIC19.79■□□□□ 0.76
SNRNP200O75643 TSPY6P-201ENST00000448518 926 ntBASIC19.79■□□□□ 0.76
SNRNP200O75643 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.79■□□□□ 0.76
SNRNP200O75643 MIR2861-201ENST00000636310 90 ntBASIC19.79■□□□□ 0.76
SNRNP200O75643 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.79■□□□□ 0.76
SNRNP200O75643 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.79■□□□□ 0.76
SNRNP200O75643 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SNRNP200O75643 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.79■□□□□ 0.76
SNRNP200O75643 CLDN5-201ENST00000403084 2357 ntBASIC19.79■□□□□ 0.76
SNRNP200O75643 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.79■□□□□ 0.76
SNRNP200O75643 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.79■□□□□ 0.76
SNRNP200O75643 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.79■□□□□ 0.76
SNRNP200O75643 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNRNP200O75643 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP200O75643 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP200O75643 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.78■□□□□ 0.76
SNRNP200O75643 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.78■□□□□ 0.76
SNRNP200O75643 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP200O75643 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP200O75643 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP200O75643 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.78■□□□□ 0.76
SNRNP200O75643 AC069152.1-201ENST00000438030 544 ntBASIC19.78■□□□□ 0.76
SNRNP200O75643 CDV3P1-201ENST00000471403 739 ntBASIC19.78■□□□□ 0.76
SNRNP200O75643 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.78■□□□□ 0.76
SNRNP200O75643 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.78■□□□□ 0.76
SNRNP200O75643 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP200O75643 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNRNP200O75643 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.77■□□□□ 0.76
SNRNP200O75643 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP200O75643 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP200O75643 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.77■□□□□ 0.76
SNRNP200O75643 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.77■□□□□ 0.76
SNRNP200O75643 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.77■□□□□ 0.76
SNRNP200O75643 CYP2T3P-201ENST00000601990 817 ntBASIC19.77■□□□□ 0.76
SNRNP200O75643 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP200O75643 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNRNP200O75643 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.77■□□□□ 0.76
SNRNP200O75643 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNRNP200O75643 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SNRNP200O75643 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SNRNP200O75643 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.76■□□□□ 0.75
SNRNP200O75643 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SNRNP200O75643 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SNRNP200O75643 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.76■□□□□ 0.75
SNRNP200O75643 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.76■□□□□ 0.75
SNRNP200O75643 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNRNP200O75643 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.76■□□□□ 0.75
SNRNP200O75643 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SNRNP200O75643 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
SNRNP200O75643 FAM21FP-204ENST00000608637 956 ntBASIC19.75■□□□□ 0.75
SNRNP200O75643 AC008694.1-202ENST00000636953 945 ntBASIC19.75■□□□□ 0.75
SNRNP200O75643 MYC-209ENST00000641252 345 ntBASIC19.75■□□□□ 0.75
SNRNP200O75643 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP200O75643 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
SNRNP200O75643 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP200O75643 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP200O75643 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.75■□□□□ 0.75
SNRNP200O75643 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP200O75643 MCRIP2P1-201ENST00000394346 511 ntBASIC19.75■□□□□ 0.75
SNRNP200O75643 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP200O75643 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SNRNP200O75643 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms