Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CNOT3O75175 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT3O75175 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNOT3O75175 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT3O75175 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.92■□□□□ 0.78
CNOT3O75175 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT3O75175 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CNOT3O75175 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CNOT3O75175 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT3O75175 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT3O75175 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.91■□□□□ 0.78
CNOT3O75175 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 AC003102.1-202ENST00000563394 1796 ntBASIC19.91■□□□□ 0.78
CNOT3O75175 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.91■□□□□ 0.78
CNOT3O75175 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.91■□□□□ 0.78
CNOT3O75175 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.91■□□□□ 0.78
CNOT3O75175 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.91■□□□□ 0.78
CNOT3O75175 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CNOT3O75175 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.91■□□□□ 0.78
CNOT3O75175 AC005181.1-201ENST00000604782 1256 ntBASIC19.91■□□□□ 0.78
CNOT3O75175 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.91■□□□□ 0.78
CNOT3O75175 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CNOT3O75175 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CNOT3O75175 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 FAM99A-202ENST00000538190 1989 ntBASIC19.9■□□□□ 0.78
CNOT3O75175 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 GPX1P1-201ENST00000388829 606 ntBASIC19.9■□□□□ 0.78
CNOT3O75175 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.9■□□□□ 0.78
CNOT3O75175 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.9■□□□□ 0.78
CNOT3O75175 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
CNOT3O75175 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.9■□□□□ 0.78
CNOT3O75175 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CNOT3O75175 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CNOT3O75175 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CNOT3O75175 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CNOT3O75175 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT3O75175 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT3O75175 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CNOT3O75175 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT3O75175 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.89■□□□□ 0.77
CNOT3O75175 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT3O75175 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT3O75175 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT3O75175 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT3O75175 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CNOT3O75175 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.89■□□□□ 0.77
CNOT3O75175 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.89■□□□□ 0.77
CNOT3O75175 SLC7A5P1-201ENST00000568957 537 ntBASIC19.89■□□□□ 0.77
CNOT3O75175 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.89■□□□□ 0.77
CNOT3O75175 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CNOT3O75175 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CNOT3O75175 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.89■□□□□ 0.77
CNOT3O75175 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT3O75175 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT3O75175 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT3O75175 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.88■□□□□ 0.77
CNOT3O75175 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 AL355802.2-201ENST00000402069 882 ntBASIC19.88■□□□□ 0.77
CNOT3O75175 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 GUSBP6-202ENST00000438529 1198 ntBASIC19.88■□□□□ 0.77
CNOT3O75175 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT3O75175 AC083906.2-201ENST00000511578 360 ntBASIC19.88■□□□□ 0.77
CNOT3O75175 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT3O75175 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT3O75175 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CNOT3O75175 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.88■□□□□ 0.77
CNOT3O75175 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT3O75175 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT3O75175 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT3O75175 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CNOT3O75175 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CNOT3O75175 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms