Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PTCD1O75127 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC26.61■■□□□ 1.85
PTCD1O75127 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD1O75127 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD1O75127 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD1O75127 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD1O75127 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD1O75127 MIR4497-201ENST00000583208 89 ntBASIC26.61■■□□□ 1.85
PTCD1O75127 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC26.61■■□□□ 1.85
PTCD1O75127 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD1O75127 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.61■■□□□ 1.85
PTCD1O75127 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD1O75127 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC26.61■■□□□ 1.85
PTCD1O75127 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PTCD1O75127 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PTCD1O75127 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.6■■□□□ 1.85
PTCD1O75127 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.6■■□□□ 1.85
PTCD1O75127 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PTCD1O75127 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PTCD1O75127 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PTCD1O75127 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
PTCD1O75127 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
PTCD1O75127 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD1O75127 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.59■■□□□ 1.85
PTCD1O75127 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD1O75127 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.59■■□□□ 1.85
PTCD1O75127 POM121L13P-201ENST00000422362 380 ntBASIC26.59■■□□□ 1.85
PTCD1O75127 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD1O75127 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.59■■□□□ 1.85
PTCD1O75127 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
PTCD1O75127 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD1O75127 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD1O75127 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.59■■□□□ 1.85
PTCD1O75127 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.59■■□□□ 1.85
PTCD1O75127 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD1O75127 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD1O75127 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCD1O75127 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCD1O75127 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PTCD1O75127 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
PTCD1O75127 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.58■■□□□ 1.85
PTCD1O75127 SNORA78-201ENST00000459373 127 ntBASIC26.58■■□□□ 1.85
PTCD1O75127 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PTCD1O75127 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
PTCD1O75127 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
PTCD1O75127 C2orf69P4-201ENST00000565394 541 ntBASIC26.58■■□□□ 1.85
PTCD1O75127 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
PTCD1O75127 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.57■■□□□ 1.84
PTCD1O75127 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.57■■□□□ 1.84
PTCD1O75127 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.57■■□□□ 1.84
PTCD1O75127 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.57■■□□□ 1.84
PTCD1O75127 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
PTCD1O75127 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.57■■□□□ 1.84
PTCD1O75127 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
PTCD1O75127 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.57■■□□□ 1.84
PTCD1O75127 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD1O75127 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD1O75127 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD1O75127 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD1O75127 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
PTCD1O75127 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD1O75127 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD1O75127 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.56■■□□□ 1.84
PTCD1O75127 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD1O75127 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD1O75127 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD1O75127 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PTCD1O75127 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTCD1O75127 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.55■■□□□ 1.84
PTCD1O75127 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC26.55■■□□□ 1.84
PTCD1O75127 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.55■■□□□ 1.84
PTCD1O75127 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.55■■□□□ 1.84
PTCD1O75127 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.55■■□□□ 1.84
PTCD1O75127 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTCD1O75127 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
PTCD1O75127 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
PTCD1O75127 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTCD1O75127 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTCD1O75127 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCD1O75127 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCD1O75127 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
PTCD1O75127 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.54■■□□□ 1.84
PTCD1O75127 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTCD1O75127 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCD1O75127 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCD1O75127 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTCD1O75127 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD1O75127 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD1O75127 ISG20-202ENST00000379224 540 ntTSL 3 BASIC26.53■■□□□ 1.84
PTCD1O75127 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.53■■□□□ 1.84
PTCD1O75127 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC26.53■■□□□ 1.84
PTCD1O75127 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms