Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PFDN1O60925 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
PFDN1O60925 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.49■□□□□ 0.55
PFDN1O60925 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.49■□□□□ 0.55
PFDN1O60925 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.49■□□□□ 0.55
PFDN1O60925 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PFDN1O60925 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PFDN1O60925 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PFDN1O60925 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.49■□□□□ 0.55
PFDN1O60925 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PFDN1O60925 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
PFDN1O60925 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PFDN1O60925 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.48■□□□□ 0.55
PFDN1O60925 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PFDN1O60925 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PFDN1O60925 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PFDN1O60925 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PFDN1O60925 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PFDN1O60925 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PFDN1O60925 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.48■□□□□ 0.55
PFDN1O60925 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PFDN1O60925 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PFDN1O60925 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PFDN1O60925 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PFDN1O60925 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PFDN1O60925 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.47■□□□□ 0.55
PFDN1O60925 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PFDN1O60925 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PFDN1O60925 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PFDN1O60925 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.47■□□□□ 0.55
PFDN1O60925 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 FER1L4-210ENST00000615531 5998 ntBASIC18.47■□□□□ 0.55
PFDN1O60925 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 AL049796.1-201ENST00000565336 1766 ntBASIC18.47■□□□□ 0.55
PFDN1O60925 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PFDN1O60925 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.47■□□□□ 0.55
PFDN1O60925 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
PFDN1O60925 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
PFDN1O60925 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN1O60925 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PFDN1O60925 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN1O60925 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
PFDN1O60925 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN1O60925 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN1O60925 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PFDN1O60925 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.46■□□□□ 0.55
PFDN1O60925 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.46■□□□□ 0.55
PFDN1O60925 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PFDN1O60925 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
PFDN1O60925 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.54
PFDN1O60925 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PFDN1O60925 AC079598.2-202ENST00000546624 1451 ntBASIC18.46■□□□□ 0.54
PFDN1O60925 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PFDN1O60925 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.45■□□□□ 0.54
PFDN1O60925 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PFDN1O60925 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.45■□□□□ 0.54
PFDN1O60925 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PFDN1O60925 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms