Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.98■□□□□ 0.95
PRAMEF11O60813 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.98■□□□□ 0.95
PRAMEF11O60813 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.98■□□□□ 0.95
PRAMEF11O60813 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.98■□□□□ 0.95
PRAMEF11O60813 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF11O60813 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF11O60813 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF11O60813 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF11O60813 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF11O60813 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF11O60813 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF11O60813 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF11O60813 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRAMEF11O60813 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF11O60813 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF11O60813 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF11O60813 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF11O60813 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
PRAMEF11O60813 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.96■□□□□ 0.95
PRAMEF11O60813 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF11O60813 NCF1B-203ENST00000435988 1254 ntBASIC20.96■□□□□ 0.95
PRAMEF11O60813 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.96■□□□□ 0.95
PRAMEF11O60813 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.96■□□□□ 0.95
PRAMEF11O60813 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF11O60813 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF11O60813 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF11O60813 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF11O60813 AC006128.1-201ENST00000624704 1661 ntBASIC20.96■□□□□ 0.95
PRAMEF11O60813 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF11O60813 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF11O60813 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF11O60813 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF11O60813 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.95■□□□□ 0.94
PRAMEF11O60813 AL512625.2-201ENST00000417533 625 ntBASIC20.95■□□□□ 0.94
PRAMEF11O60813 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.95■□□□□ 0.94
PRAMEF11O60813 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.95■□□□□ 0.94
PRAMEF11O60813 AC093787.1-201ENST00000450396 207 ntBASIC20.95■□□□□ 0.94
PRAMEF11O60813 AF201337.1-201ENST00000520239 748 ntBASIC20.95■□□□□ 0.94
PRAMEF11O60813 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.95■□□□□ 0.94
PRAMEF11O60813 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.95■□□□□ 0.94
PRAMEF11O60813 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF11O60813 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF11O60813 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.95■□□□□ 0.94
PRAMEF11O60813 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF11O60813 AC027702.1-201ENST00000563810 1770 ntBASIC20.95■□□□□ 0.94
PRAMEF11O60813 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF11O60813 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF11O60813 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF11O60813 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
PRAMEF11O60813 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.94■□□□□ 0.94
PRAMEF11O60813 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.94■□□□□ 0.94
PRAMEF11O60813 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF11O60813 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEF11O60813 AC083906.2-201ENST00000511578 360 ntBASIC20.94■□□□□ 0.94
PRAMEF11O60813 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.94■□□□□ 0.94
PRAMEF11O60813 AL121832.2-201ENST00000610979 668 ntBASIC20.94■□□□□ 0.94
PRAMEF11O60813 AC100791.3-201ENST00000617619 330 ntBASIC20.94■□□□□ 0.94
PRAMEF11O60813 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.94■□□□□ 0.94
PRAMEF11O60813 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF11O60813 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF11O60813 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PRAMEF11O60813 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRAMEF11O60813 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.94■□□□□ 0.94
PRAMEF11O60813 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEF11O60813 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF11O60813 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF11O60813 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.93■□□□□ 0.94
PRAMEF11O60813 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF11O60813 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.93■□□□□ 0.94
PRAMEF11O60813 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF11O60813 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF11O60813 AC105036.2-201ENST00000569468 176 ntBASIC20.93■□□□□ 0.94
PRAMEF11O60813 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.93■□□□□ 0.94
PRAMEF11O60813 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PRAMEF11O60813 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.93■□□□□ 0.94
PRAMEF11O60813 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PRAMEF11O60813 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRAMEF11O60813 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.93■□□□□ 0.94
PRAMEF11O60813 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEF11O60813 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.92■□□□□ 0.94
PRAMEF11O60813 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF11O60813 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.92■□□□□ 0.94
PRAMEF11O60813 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF11O60813 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF11O60813 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF11O60813 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.92■□□□□ 0.94
PRAMEF11O60813 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.92■□□□□ 0.94
PRAMEF11O60813 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.92■□□□□ 0.94
PRAMEF11O60813 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRAMEF11O60813 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms