Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCN1O60741 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN1O60741 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCN1O60741 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HCN1O60741 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.21■□□□□ 0.67
HCN1O60741 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HCN1O60741 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.21■□□□□ 0.67
HCN1O60741 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.21■□□□□ 0.67
HCN1O60741 MYCNOS-205ENST00000641950 531 ntBASIC19.21■□□□□ 0.67
HCN1O60741 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HCN1O60741 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN1O60741 AC003102.1-202ENST00000563394 1796 ntBASIC19.21■□□□□ 0.67
HCN1O60741 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCN1O60741 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
HCN1O60741 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.21■□□□□ 0.67
HCN1O60741 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.21■□□□□ 0.67
HCN1O60741 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HCN1O60741 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HCN1O60741 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HCN1O60741 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.2■□□□□ 0.66
HCN1O60741 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN1O60741 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HCN1O60741 AC006970.2-201ENST00000450065 779 ntBASIC19.2■□□□□ 0.66
HCN1O60741 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN1O60741 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.2■□□□□ 0.66
HCN1O60741 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.2■□□□□ 0.66
HCN1O60741 AC231657.2-201ENST00000624556 255 ntBASIC19.2■□□□□ 0.66
HCN1O60741 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCN1O60741 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.2■□□□□ 0.66
HCN1O60741 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN1O60741 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCN1O60741 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HCN1O60741 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCN1O60741 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HCN1O60741 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN1O60741 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN1O60741 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN1O60741 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.19■□□□□ 0.66
HCN1O60741 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.19■□□□□ 0.66
HCN1O60741 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HCN1O60741 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HCN1O60741 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN1O60741 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.19■□□□□ 0.66
HCN1O60741 LINC01521-201ENST00000504184 1943 ntBASIC19.19■□□□□ 0.66
HCN1O60741 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCN1O60741 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HCN1O60741 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HCN1O60741 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.18■□□□□ 0.66
HCN1O60741 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.18■□□□□ 0.66
HCN1O60741 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.18■□□□□ 0.66
HCN1O60741 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN1O60741 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN1O60741 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.18■□□□□ 0.66
HCN1O60741 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCN1O60741 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HCN1O60741 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.17■□□□□ 0.66
HCN1O60741 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HCN1O60741 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.17■□□□□ 0.66
HCN1O60741 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.17■□□□□ 0.66
HCN1O60741 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 HLA-L-209ENST00000420110 1011 ntBASIC19.17■□□□□ 0.66
HCN1O60741 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 SLC7A5P1-201ENST00000568957 537 ntBASIC19.17■□□□□ 0.66
HCN1O60741 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.17■□□□□ 0.66
HCN1O60741 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.17■□□□□ 0.66
HCN1O60741 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.17■□□□□ 0.66
HCN1O60741 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HCN1O60741 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.17■□□□□ 0.66
HCN1O60741 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
HCN1O60741 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCN1O60741 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms