Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.17■□□□□ 0.5
GMDSO60547 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.17■□□□□ 0.5
GMDSO60547 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GMDSO60547 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GMDSO60547 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GMDSO60547 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GMDSO60547 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.17■□□□□ 0.5
GMDSO60547 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
GMDSO60547 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GMDSO60547 AC055733.4-201ENST00000638462 1354 ntBASIC18.17■□□□□ 0.5
GMDSO60547 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GMDSO60547 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
GMDSO60547 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
GMDSO60547 ZNRF2P3-201ENST00000424200 374 ntBASIC18.16■□□□□ 0.5
GMDSO60547 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.16■□□□□ 0.5
GMDSO60547 MIR6084-201ENST00000622012 110 ntBASIC18.16■□□□□ 0.5
GMDSO60547 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
GMDSO60547 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
GMDSO60547 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
GMDSO60547 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
GMDSO60547 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.15■□□□□ 0.5
GMDSO60547 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
GMDSO60547 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.15■□□□□ 0.5
GMDSO60547 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 TPRG1LP1-201ENST00000598702 760 ntBASIC18.15■□□□□ 0.5
GMDSO60547 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
GMDSO60547 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.15■□□□□ 0.5
GMDSO60547 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.15■□□□□ 0.5
GMDSO60547 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.15■□□□□ 0.5
GMDSO60547 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
GMDSO60547 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.15■□□□□ 0.5
GMDSO60547 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.15■□□□□ 0.5
GMDSO60547 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.15■□□□□ 0.5
GMDSO60547 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
GMDSO60547 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.14■□□□□ 0.5
GMDSO60547 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.14■□□□□ 0.5
GMDSO60547 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.14■□□□□ 0.49
GMDSO60547 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.14■□□□□ 0.49
GMDSO60547 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.14■□□□□ 0.49
GMDSO60547 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.14■□□□□ 0.49
GMDSO60547 AC123595.1-201ENST00000440769 1046 ntBASIC18.14■□□□□ 0.49
GMDSO60547 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.14■□□□□ 0.49
GMDSO60547 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GMDSO60547 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.14■□□□□ 0.49
GMDSO60547 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.14■□□□□ 0.49
GMDSO60547 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
GMDSO60547 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.14■□□□□ 0.49
GMDSO60547 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
GMDSO60547 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GMDSO60547 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
GMDSO60547 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
GMDSO60547 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
GMDSO60547 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.14■□□□□ 0.49
GMDSO60547 GABARAPL3-202ENST00000624044 1851 ntBASIC18.14■□□□□ 0.49
GMDSO60547 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.13■□□□□ 0.49
GMDSO60547 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.13■□□□□ 0.49
GMDSO60547 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.13■□□□□ 0.49
GMDSO60547 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.13■□□□□ 0.49
GMDSO60547 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GMDSO60547 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.13■□□□□ 0.49
GMDSO60547 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms