Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZIC3O60481 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZIC3O60481 AC007375.3-201ENST00000600936 2314 ntBASIC18.62■□□□□ 0.57
ZIC3O60481 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC3O60481 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC3O60481 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC3O60481 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.61■□□□□ 0.57
ZIC3O60481 MCRIP2P1-201ENST00000394346 511 ntBASIC18.61■□□□□ 0.57
ZIC3O60481 BX276092.2-201ENST00000417668 665 ntBASIC18.61■□□□□ 0.57
ZIC3O60481 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZIC3O60481 AL355472.2-201ENST00000422958 438 ntBASIC18.61■□□□□ 0.57
ZIC3O60481 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.61■□□□□ 0.57
ZIC3O60481 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC3O60481 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.61■□□□□ 0.57
ZIC3O60481 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.61■□□□□ 0.57
ZIC3O60481 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC3O60481 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZIC3O60481 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZIC3O60481 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.61■□□□□ 0.57
ZIC3O60481 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZIC3O60481 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZIC3O60481 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.6■□□□□ 0.57
ZIC3O60481 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.6■□□□□ 0.57
ZIC3O60481 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.6■□□□□ 0.57
ZIC3O60481 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZIC3O60481 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ZIC3O60481 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.6■□□□□ 0.57
ZIC3O60481 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
ZIC3O60481 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZIC3O60481 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 AC005229.4-201ENST00000610085 2198 ntBASIC18.59■□□□□ 0.57
ZIC3O60481 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZIC3O60481 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.59■□□□□ 0.57
ZIC3O60481 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.59■□□□□ 0.57
ZIC3O60481 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.59■□□□□ 0.57
ZIC3O60481 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ZIC3O60481 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.59■□□□□ 0.57
ZIC3O60481 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.59■□□□□ 0.57
ZIC3O60481 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZIC3O60481 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.59■□□□□ 0.57
ZIC3O60481 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.59■□□□□ 0.57
ZIC3O60481 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.59■□□□□ 0.57
ZIC3O60481 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.59■□□□□ 0.57
ZIC3O60481 CYP2T3P-201ENST00000601990 817 ntBASIC18.59■□□□□ 0.57
ZIC3O60481 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.59■□□□□ 0.57
ZIC3O60481 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.59■□□□□ 0.57
ZIC3O60481 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.59■□□□□ 0.57
ZIC3O60481 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.59■□□□□ 0.57
ZIC3O60481 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.59■□□□□ 0.57
ZIC3O60481 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ZIC3O60481 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZIC3O60481 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZIC3O60481 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZIC3O60481 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZIC3O60481 CYP21A1P-202ENST00000354927 1481 ntBASIC18.58■□□□□ 0.57
ZIC3O60481 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZIC3O60481 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZIC3O60481 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZIC3O60481 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.58■□□□□ 0.57
ZIC3O60481 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZIC3O60481 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZIC3O60481 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.58■□□□□ 0.56
ZIC3O60481 AC073210.2-201ENST00000430369 194 ntBASIC18.58■□□□□ 0.56
ZIC3O60481 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.58■□□□□ 0.56
ZIC3O60481 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.58■□□□□ 0.56
ZIC3O60481 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.58■□□□□ 0.56
ZIC3O60481 MIR4758-201ENST00000577688 71 ntBASIC18.58■□□□□ 0.56
ZIC3O60481 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.58■□□□□ 0.56
ZIC3O60481 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.58■□□□□ 0.56
ZIC3O60481 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZIC3O60481 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZIC3O60481 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZIC3O60481 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZIC3O60481 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZIC3O60481 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ZIC3O60481 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.57■□□□□ 0.56
ZIC3O60481 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.57■□□□□ 0.56
ZIC3O60481 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.57■□□□□ 0.56
ZIC3O60481 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZIC3O60481 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.57■□□□□ 0.56
ZIC3O60481 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
ZIC3O60481 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms