Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 PLK5-205ENST00000642079 1969 ntBASIC19.84■□□□□ 0.77
PRICKLE3O43900 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.84■□□□□ 0.77
PRICKLE3O43900 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
PRICKLE3O43900 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.84■□□□□ 0.77
PRICKLE3O43900 TSPY6P-201ENST00000448518 926 ntBASIC19.84■□□□□ 0.77
PRICKLE3O43900 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.84■□□□□ 0.77
PRICKLE3O43900 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.84■□□□□ 0.77
PRICKLE3O43900 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PRICKLE3O43900 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRICKLE3O43900 AC010980.2-201ENST00000587099 1412 ntBASIC19.84■□□□□ 0.77
PRICKLE3O43900 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRICKLE3O43900 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRICKLE3O43900 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PRICKLE3O43900 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRICKLE3O43900 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.83■□□□□ 0.77
PRICKLE3O43900 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRICKLE3O43900 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.83■□□□□ 0.77
PRICKLE3O43900 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PRICKLE3O43900 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRICKLE3O43900 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRICKLE3O43900 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.83■□□□□ 0.77
PRICKLE3O43900 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRICKLE3O43900 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRICKLE3O43900 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRICKLE3O43900 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRICKLE3O43900 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
PRICKLE3O43900 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRICKLE3O43900 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
PRICKLE3O43900 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PRICKLE3O43900 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 AC104771.1-201ENST00000603335 964 ntBASIC19.82■□□□□ 0.76
PRICKLE3O43900 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.82■□□□□ 0.76
PRICKLE3O43900 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PRICKLE3O43900 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRICKLE3O43900 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRICKLE3O43900 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRICKLE3O43900 HLA-L-209ENST00000420110 1011 ntBASIC19.81■□□□□ 0.76
PRICKLE3O43900 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRICKLE3O43900 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 AL109923.1-201ENST00000618799 583 ntBASIC19.81■□□□□ 0.76
PRICKLE3O43900 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PRICKLE3O43900 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PRICKLE3O43900 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRICKLE3O43900 AC027702.1-201ENST00000563810 1770 ntBASIC19.8■□□□□ 0.76
PRICKLE3O43900 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRICKLE3O43900 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PRICKLE3O43900 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.8■□□□□ 0.76
PRICKLE3O43900 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.8■□□□□ 0.76
PRICKLE3O43900 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PRICKLE3O43900 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.8■□□□□ 0.76
PRICKLE3O43900 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.8■□□□□ 0.76
PRICKLE3O43900 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.8■□□□□ 0.76
PRICKLE3O43900 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PRICKLE3O43900 CYP21A1P-202ENST00000354927 1481 ntBASIC19.79■□□□□ 0.76
PRICKLE3O43900 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 AL137060.1-201ENST00000618151 2648 ntBASIC19.79■□□□□ 0.76
PRICKLE3O43900 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PRICKLE3O43900 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PRICKLE3O43900 MCRIP2P1-201ENST00000394346 511 ntBASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms