Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.91■□□□□ 0.94
SMAD6O43541 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD6O43541 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SMAD6O43541 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD6O43541 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD6O43541 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.91■□□□□ 0.94
SMAD6O43541 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD6O43541 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD6O43541 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.91■□□□□ 0.94
SMAD6O43541 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SMAD6O43541 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD6O43541 CYP2T3P-201ENST00000601990 817 ntBASIC20.91■□□□□ 0.94
SMAD6O43541 AC100791.3-201ENST00000617619 330 ntBASIC20.91■□□□□ 0.94
SMAD6O43541 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.91■□□□□ 0.94
SMAD6O43541 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SMAD6O43541 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.9■□□□□ 0.94
SMAD6O43541 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 MCRIP2P1-201ENST00000394346 511 ntBASIC20.9■□□□□ 0.94
SMAD6O43541 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.9■□□□□ 0.94
SMAD6O43541 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.9■□□□□ 0.94
SMAD6O43541 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.9■□□□□ 0.94
SMAD6O43541 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.9■□□□□ 0.94
SMAD6O43541 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.9■□□□□ 0.94
SMAD6O43541 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD6O43541 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.89■□□□□ 0.94
SMAD6O43541 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SMAD6O43541 CYP21A1P-202ENST00000354927 1481 ntBASIC20.89■□□□□ 0.94
SMAD6O43541 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD6O43541 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.89■□□□□ 0.93
SMAD6O43541 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD6O43541 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.89■□□□□ 0.93
SMAD6O43541 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.89■□□□□ 0.93
SMAD6O43541 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.89■□□□□ 0.93
SMAD6O43541 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.89■□□□□ 0.93
SMAD6O43541 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SMAD6O43541 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.89■□□□□ 0.93
SMAD6O43541 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD6O43541 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.88■□□□□ 0.93
SMAD6O43541 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD6O43541 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.88■□□□□ 0.93
SMAD6O43541 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD6O43541 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD6O43541 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SMAD6O43541 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD6O43541 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.88■□□□□ 0.93
SMAD6O43541 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD6O43541 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
SMAD6O43541 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.88■□□□□ 0.93
SMAD6O43541 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 AC011484.1-201ENST00000377652 1995 ntBASIC20.87■□□□□ 0.93
SMAD6O43541 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.87■□□□□ 0.93
SMAD6O43541 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.87■□□□□ 0.93
SMAD6O43541 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.87■□□□□ 0.93
SMAD6O43541 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD6O43541 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.86■□□□□ 0.93
SMAD6O43541 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD6O43541 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD6O43541 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD6O43541 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD6O43541 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.86■□□□□ 0.93
SMAD6O43541 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SMAD6O43541 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SMAD6O43541 LSM12P1-201ENST00000411836 588 ntBASIC20.86■□□□□ 0.93
SMAD6O43541 DUSP5P2-201ENST00000426873 1033 ntBASIC20.86■□□□□ 0.93
SMAD6O43541 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.86■□□□□ 0.93
SMAD6O43541 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.86■□□□□ 0.93
SMAD6O43541 KRT18P6-201ENST00000555540 1265 ntBASIC20.86■□□□□ 0.93
SMAD6O43541 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SMAD6O43541 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms