Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TSPY6P-201ENST00000448518 926 ntBASIC25.66■■□□□ 1.7
SRGAP3O43295 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SRGAP3O43295 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.66■■□□□ 1.7
SRGAP3O43295 AC104771.1-201ENST00000603335 964 ntBASIC25.66■■□□□ 1.7
SRGAP3O43295 AL109923.1-201ENST00000618799 583 ntBASIC25.66■■□□□ 1.7
SRGAP3O43295 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SRGAP3O43295 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.66■■□□□ 1.7
SRGAP3O43295 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
SRGAP3O43295 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SRGAP3O43295 PLK5-205ENST00000642079 1969 ntBASIC25.65■■□□□ 1.7
SRGAP3O43295 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SRGAP3O43295 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SRGAP3O43295 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SRGAP3O43295 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.65■■□□□ 1.7
SRGAP3O43295 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
SRGAP3O43295 CLDN5-201ENST00000403084 2357 ntBASIC25.65■■□□□ 1.7
SRGAP3O43295 AL512625.2-201ENST00000417533 625 ntBASIC25.65■■□□□ 1.7
SRGAP3O43295 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SRGAP3O43295 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.65■■□□□ 1.7
SRGAP3O43295 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
SRGAP3O43295 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SRGAP3O43295 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.64■■□□□ 1.7
SRGAP3O43295 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SRGAP3O43295 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SRGAP3O43295 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
SRGAP3O43295 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SRGAP3O43295 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
SRGAP3O43295 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.64■■□□□ 1.7
SRGAP3O43295 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.64■■□□□ 1.7
SRGAP3O43295 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.64■■□□□ 1.7
SRGAP3O43295 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC25.64■■□□□ 1.69
SRGAP3O43295 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SRGAP3O43295 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.63■■□□□ 1.69
SRGAP3O43295 AC010980.2-201ENST00000587099 1412 ntBASIC25.63■■□□□ 1.69
SRGAP3O43295 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SRGAP3O43295 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SRGAP3O43295 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SRGAP3O43295 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.63■■□□□ 1.69
SRGAP3O43295 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SRGAP3O43295 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SRGAP3O43295 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SRGAP3O43295 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC25.63■■□□□ 1.69
SRGAP3O43295 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.63■■□□□ 1.69
SRGAP3O43295 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.63■■□□□ 1.69
SRGAP3O43295 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SRGAP3O43295 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SRGAP3O43295 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.63■■□□□ 1.69
SRGAP3O43295 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
SRGAP3O43295 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SRGAP3O43295 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SRGAP3O43295 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.62■■□□□ 1.69
SRGAP3O43295 GAMT-205ENST00000640762 751 ntTSL 5 BASIC25.62■■□□□ 1.69
SRGAP3O43295 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.62■■□□□ 1.69
SRGAP3O43295 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SRGAP3O43295 MKRN4P-201ENST00000444706 1521 ntBASIC25.62■■□□□ 1.69
SRGAP3O43295 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
SRGAP3O43295 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.62■■□□□ 1.69
SRGAP3O43295 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SRGAP3O43295 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
SRGAP3O43295 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SRGAP3O43295 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.61■■□□□ 1.69
SRGAP3O43295 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SRGAP3O43295 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC25.61■■□□□ 1.69
SRGAP3O43295 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
SRGAP3O43295 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC25.61■■□□□ 1.69
SRGAP3O43295 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.61■■□□□ 1.69
SRGAP3O43295 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.61■■□□□ 1.69
SRGAP3O43295 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SRGAP3O43295 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
SRGAP3O43295 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SRGAP3O43295 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SRGAP3O43295 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SRGAP3O43295 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SRGAP3O43295 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.61■■□□□ 1.69
SRGAP3O43295 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.6■■□□□ 1.69
SRGAP3O43295 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SRGAP3O43295 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25.6■■□□□ 1.69
SRGAP3O43295 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC25.6■■□□□ 1.69
SRGAP3O43295 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SRGAP3O43295 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.6■■□□□ 1.69
SRGAP3O43295 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
SRGAP3O43295 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.6■■□□□ 1.69
SRGAP3O43295 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SRGAP3O43295 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
SRGAP3O43295 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC25.59■■□□□ 1.69
SRGAP3O43295 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SRGAP3O43295 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.59■■□□□ 1.69
SRGAP3O43295 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
SRGAP3O43295 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.59■■□□□ 1.69
SRGAP3O43295 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.59■■□□□ 1.69
SRGAP3O43295 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms