Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.24■□□□□ 0.83
CDC7O00311 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.24■□□□□ 0.83
CDC7O00311 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CDC7O00311 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.24■□□□□ 0.83
CDC7O00311 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.24■□□□□ 0.83
CDC7O00311 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CDC7O00311 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.24■□□□□ 0.83
CDC7O00311 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.24■□□□□ 0.83
CDC7O00311 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDC7O00311 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDC7O00311 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDC7O00311 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CDC7O00311 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC7O00311 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC7O00311 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC7O00311 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDC7O00311 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.23■□□□□ 0.83
CDC7O00311 KRT18P20-201ENST00000548986 1279 ntBASIC20.23■□□□□ 0.83
CDC7O00311 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.23■□□□□ 0.83
CDC7O00311 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.23■□□□□ 0.83
CDC7O00311 GABARAPL3-202ENST00000624044 1851 ntBASIC20.23■□□□□ 0.83
CDC7O00311 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.23■□□□□ 0.83
CDC7O00311 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC7O00311 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC7O00311 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDC7O00311 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.22■□□□□ 0.83
CDC7O00311 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.22■□□□□ 0.83
CDC7O00311 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC7O00311 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC7O00311 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.22■□□□□ 0.83
CDC7O00311 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDC7O00311 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.22■□□□□ 0.83
CDC7O00311 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC7O00311 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
CDC7O00311 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC7O00311 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC7O00311 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDC7O00311 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC7O00311 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC7O00311 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDC7O00311 KRT19P1-201ENST00000405746 1186 ntBASIC20.21■□□□□ 0.83
CDC7O00311 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDC7O00311 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.21■□□□□ 0.83
CDC7O00311 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.21■□□□□ 0.83
CDC7O00311 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.21■□□□□ 0.83
CDC7O00311 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.21■□□□□ 0.83
CDC7O00311 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.21■□□□□ 0.83
CDC7O00311 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.21■□□□□ 0.83
CDC7O00311 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC7O00311 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC7O00311 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC7O00311 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC7O00311 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDC7O00311 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC7O00311 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.83
CDC7O00311 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.2■□□□□ 0.82
CDC7O00311 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.2■□□□□ 0.82
CDC7O00311 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
CDC7O00311 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 SLC25A24-204ENST00000569674 2357 ntBASIC20.2■□□□□ 0.82
CDC7O00311 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 AC097381.1-201ENST00000429019 1296 ntBASIC20.2■□□□□ 0.82
CDC7O00311 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.2■□□□□ 0.82
CDC7O00311 AC087623.3-201ENST00000607047 1098 ntBASIC20.2■□□□□ 0.82
CDC7O00311 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDC7O00311 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDC7O00311 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.19■□□□□ 0.82
CDC7O00311 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.19■□□□□ 0.82
CDC7O00311 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDC7O00311 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms