Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 POU5F1P3-201ENST00000428824 1078 ntBASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.7■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 FBXW4P1-201ENST00000426721 2239 ntBASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 PGM5P4-201ENST00000421970 445 ntBASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 AC105020.6-201ENST00000621523 1217 ntBASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 EP400NL-214ENST00000641289 2402 ntBASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.68■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.67■□□□□ 0.9
C1QTNF3-AMACRE9PGA6 Z98882.1-201ENST00000622160 2253 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms