Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM49D1C9J1S8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 AC061975.6-201ENST00000579045 1553 ntBASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 EEF1DP3-203ENST00000566025 782 ntBASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM49D1C9J1S8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.64■□□□□ 0.9
TRIM49D1C9J1S8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM49D1C9J1S8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.64■□□□□ 0.9
TRIM49D1C9J1S8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 AC099778.1-201ENST00000568593 1911 ntBASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM49D1C9J1S8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 AP004607.4-201ENST00000530158 1459 ntBASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 AC053503.5-201ENST00000601508 636 ntBASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM49D1C9J1S8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 AC027682.1-201ENST00000562846 899 ntBASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM49D1C9J1S8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM49D1C9J1S8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM49D1C9J1S8 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM49D1C9J1S8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49D1C9J1S8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM49D1C9J1S8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRIM49D1C9J1S8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms