Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRAMEF25A6NGN4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF25A6NGN4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRAMEF25A6NGN4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PRAMEF25A6NGN4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 AC016769.1-201ENST00000409132 1010 ntBASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRAMEF25A6NGN4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 AC008175.2-201ENST00000612840 297 ntBASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.32■□□□□ 0.68
PRAMEF25A6NGN4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 AC092666.2-201ENST00000613287 246 ntBASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 AC027702.1-201ENST00000563810 1770 ntBASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRAMEF25A6NGN4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 AC121338.2-201ENST00000622535 1744 ntBASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 AL391422.3-201ENST00000603791 2761 ntBASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRAMEF25A6NGN4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRAMEF25A6NGN4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms