Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 THA1P-201ENST00000590384 1145 ntBASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 AC003102.1-202ENST00000563394 1796 ntBASIC16.27■□□□□ 0.2
RBFOX3A6NFN3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RBFOX3A6NFN3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RBFOX3A6NFN3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBFOX3A6NFN3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RBFOX3A6NFN3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.27■□□□□ 0.19
RBFOX3A6NFN3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RBFOX3A6NFN3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 AC019171.1-201ENST00000601251 1056 ntBASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 SNX5-217ENST00000606557 1087 ntBASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 AP004607.7-201ENST00000527152 1677 ntBASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 FP700111.2-201ENST00000619190 1892 ntBASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RBFOX3A6NFN3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 AC125437.2-201ENST00000625180 2167 ntBASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RBFOX3A6NFN3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 AC005703.6-201ENST00000623265 1329 ntBASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 AL031602.1-201ENST00000633169 911 ntBASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.24■□□□□ 0.19
RBFOX3A6NFN3 AC005332.7-201ENST00000614046 2005 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms