Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 AC053503.5-201ENST00000601508 636 ntBASIC20.58■□□□□ 0.89
CCDC189A1A4V9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC189A1A4V9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.58■□□□□ 0.88
CCDC189A1A4V9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC189A1A4V9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC189A1A4V9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC189A1A4V9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CCDC189A1A4V9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CCDC189A1A4V9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC189A1A4V9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 EEF1DP3-203ENST00000566025 782 ntBASIC20.57■□□□□ 0.88
CCDC189A1A4V9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC189A1A4V9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 SUDS3P1-201ENST00000505831 966 ntBASIC20.56■□□□□ 0.88
CCDC189A1A4V9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.56■□□□□ 0.88
CCDC189A1A4V9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 AL358852.1-201ENST00000623174 1268 ntBASIC20.55■□□□□ 0.88
CCDC189A1A4V9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC189A1A4V9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC189A1A4V9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 TPRG1LP1-201ENST00000598702 760 ntBASIC20.53■□□□□ 0.88
CCDC189A1A4V9 AL139246.5-201ENST00000606645 996 ntBASIC20.53■□□□□ 0.88
CCDC189A1A4V9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC189A1A4V9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms