Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC7A5P2-201ENST00000553010 536 ntBASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 AC243732.1-201ENST00000612648 864 ntBASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 AC004854.2-201ENST00000608450 1441 ntBASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV6-4A0A1B0GX49 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV6-4A0A1B0GX49 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV6-4A0A1B0GX49 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-4A0A1B0GX49 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-4A0A1B0GX49 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-4A0A1B0GX49 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-4A0A1B0GX49 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV6-4A0A1B0GX49 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 AP005212.1-201ENST00000581547 1997 ntBASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 FP700111.2-201ENST00000619190 1892 ntBASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 AL157384.1-201ENST00000445995 2473 ntBASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.52□□□□□ -0.09
TRBV6-4A0A1B0GX49 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.51□□□□□ -0.09
TRBV6-4A0A1B0GX49 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms