Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV12-1A0A0B4J245 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 GATM-206ENST00000558336 1522 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRAV12-1A0A0B4J245 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 AC087239.1-201ENST00000622671 572 ntBASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 LETM1P2-201ENST00000597330 2178 ntBASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV12-1A0A0B4J245 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV12-1A0A0B4J245 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV12-1A0A0B4J245 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV12-1A0A0B4J245 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
TRAV12-1A0A0B4J245 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV12-1A0A0B4J245 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms