Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC090340.1-201ENST00000620778 4980 ntBASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC104564.3-201ENST00000582367 638 ntBASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV8-3A0A0A6YYJ7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms