Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IL1R1-203ENST00000409589 3544 ntTSL 5 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 ELOC-202ENST00000518127 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 CAPN8-202ENST00000366873 2596 ntTSL 5 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC012640.4-201ENST00000606194 2550 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 PAN2-201ENST00000257931 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 COL17A1-203ENST00000393211 1610 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 ZNF396-204ENST00000586687 1320 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 NPAP1P4-201ENST00000443325 3310 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 ZRSR1-201ENST00000391338 1673 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 NIF3L1-204ENST00000409357 1679 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 SLU7-201ENST00000297151 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 AC023078.6-201ENST00000525272 1718 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 NONO-215ENST00000535149 2882 ntTSL 2 BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 FSHR-201ENST00000304421 2176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 ATP8B5P-202ENST00000423138 2157 ntBASIC8.71□□□□□ -1.02
NPIPA3F8WFD2 PPP2R5C-201ENST00000328724 4045 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 ADH1A-201ENST00000209668 1499 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 C9orf85-206ENST00000486911 3321 ntTSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 PDXDC1-210ENST00000563679 2963 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 ZNF2-202ENST00000611463 3737 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 KIF9-202ENST00000335044 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 CCDC113-201ENST00000219299 5272 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 GHR-212ENST00000620156 4529 ntTSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 FAM162A-203ENST00000477892 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 TUFT1-203ENST00000368849 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 ZSCAN20-201ENST00000361328 4316 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 HSPA8P6-201ENST00000451965 1552 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 PASD1-201ENST00000370357 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 LINC00470-201ENST00000412816 2031 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 ZNF2-205ENST00000622059 1624 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 SH3KBP1-203ENST00000379716 3819 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AGR2-201ENST00000401412 782 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RNA5SP158-201ENST00000410298 102 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AL353705.3-201ENST00000418694 1250 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AL136529.1-201ENST00000430540 610 ntTSL 3 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RALY-AS1-202ENST00000432859 610 ntTSL 3 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 FGF14-AS1-201ENST00000444686 294 ntTSL 3 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RN7SL449P-201ENST00000464937 286 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RN7SL865P-201ENST00000466711 289 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RN7SL7P-201ENST00000467823 298 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 FAM122B-207ENST00000493333 1078 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AC009800.1-201ENST00000511357 1006 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 PPBPP2-202ENST00000514391 346 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AP003064.1-201ENST00000526045 590 ntTSL 4 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AC087321.1-201ENST00000539105 460 ntTSL 3 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 ZMYND19P1-201ENST00000554267 787 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AC048337.1-201ENST00000557474 552 ntTSL 4 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AP006545.1-201ENST00000563059 911 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 ELOCP2-201ENST00000566760 332 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RN7SL45P-201ENST00000578050 298 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AC018761.3-201ENST00000590065 388 ntTSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RPL12P41-201ENST00000599500 498 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AC092175.1-201ENST00000605325 200 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 LINC01002-213ENST00000632086 918 ntTSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 FAM240B-201ENST00000637493 1160 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AC020558.3-201ENST00000623335 1703 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RCAN1-204ENST00000399272 2164 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 MAGEA10-202ENST00000370323 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 DMD-206ENST00000361471 2224 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 PRUNE1-203ENST00000368935 2238 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 XRCC6-205ENST00000405878 2200 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 TRPS1-211ENST00000520276 4083 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AC074194.2-201ENST00000636429 2348 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 PRNT-202ENST00000418528 1873 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 AP001324.3-201ENST00000624759 1428 ntBASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 RAP1GAP-212ENST00000542643 3426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
NPIPA3F8WFD2 ZNF736-201ENST00000355095 2098 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 PPP2R5D-203ENST00000461010 1558 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 FLNB-AS1-202ENST00000488720 3709 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 MMP2-208ENST00000570308 3235 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 TUBAP2-201ENST00000530835 1613 ntBASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 NECAP1-219ENST00000639811 2175 ntTSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 C8orf86-201ENST00000358138 2250 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 DLGAP1-AS2-201ENST00000572856 2261 ntTSL 2 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 EYA1-207ENST00000419131 1723 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 LINC00909-202ENST00000580048 3463 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 RASGEF1B-213ENST00000613784 3485 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NPIPA3F8WFD2 PNPLA1-202ENST00000388715 2332 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms