Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB11Q9Y5F2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB11Q9Y5F2 KRT16P2-201ENST00000414673 1423 ntBASIC20.25■□□□□ 0.83
PCDHB11Q9Y5F2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHB11Q9Y5F2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHB11Q9Y5F2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 MIR4758-201ENST00000577688 71 ntBASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHB11Q9Y5F2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHB11Q9Y5F2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHB11Q9Y5F2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 CNN2P6-201ENST00000439038 900 ntBASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 TERF1P5-201ENST00000477545 1207 ntBASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHB11Q9Y5F2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 MIR4651-201ENST00000582622 73 ntBASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 AC008694.1-202ENST00000636953 945 ntBASIC20.2■□□□□ 0.82
PCDHB11Q9Y5F2 FEM1AP4-201ENST00000443167 1987 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms