Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 AC239809.2-201ENST00000415381 517 ntBASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RTCBQ9Y3I0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 AC120498.8-201ENST00000614275 531 ntBASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 AC133561.5-201ENST00000635547 218 ntBASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RTCBQ9Y3I0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 MIR4785-201ENST00000585005 73 ntBASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 AL135905.2-201ENST00000584934 1404 ntBASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 AC116050.2-201ENST00000612102 1779 ntBASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RTCBQ9Y3I0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 AC110285.5-201ENST00000611501 352 ntBASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTCBQ9Y3I0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 TSPY15P-201ENST00000457163 923 ntBASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
RTCBQ9Y3I0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 AC087499.1-201ENST00000418141 1075 ntBASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTCBQ9Y3I0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 AC113410.3-201ENST00000623366 203 ntBASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.24■■□□□ 1.79
RTCBQ9Y3I0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms