Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 TSPY26P-201ENST00000476365 1326 ntBASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 AC099791.1-201ENST00000416440 715 ntBASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 AL391422.3-201ENST00000603791 2761 ntBASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 FP700111.2-201ENST00000619190 1892 ntBASIC17.78■□□□□ 0.44
MRPS28Q9Y2Q9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
MRPS28Q9Y2Q9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.77■□□□□ 0.43
MRPS28Q9Y2Q9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
MRPS28Q9Y2Q9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
MRPS28Q9Y2Q9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
MRPS28Q9Y2Q9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
MRPS28Q9Y2Q9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 AL121603.2-201ENST00000557373 2117 ntBASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 AC027682.1-201ENST00000562846 899 ntBASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
MRPS28Q9Y2Q9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MRPS28Q9Y2Q9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms