Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 AC243732.1-201ENST00000612648 864 ntBASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CNOT6Q9ULM6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 AC007322.1-201ENST00000426983 750 ntBASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CNOT6Q9ULM6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 AC007322.4-201ENST00000509611 723 ntBASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 AL050303.2-201ENST00000619798 666 ntBASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 AC013268.1-206ENST00000638368 961 ntBASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 AC112229.1-201ENST00000639295 961 ntBASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CNOT6Q9ULM6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CNOT6Q9ULM6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 Z98882.1-201ENST00000622160 2253 ntBASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 AC068338.2-201ENST00000563278 1430 ntBASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CNOT6Q9ULM6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CNOT6Q9ULM6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms