Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.75■■□□□ 1.39
DDX41Q9UJV9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.75■■□□□ 1.39
DDX41Q9UJV9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.75■■□□□ 1.39
DDX41Q9UJV9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX41Q9UJV9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX41Q9UJV9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
DDX41Q9UJV9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DDX41Q9UJV9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.75■■□□□ 1.39
DDX41Q9UJV9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 AC098934.4-201ENST00000564127 592 ntBASIC23.74■■□□□ 1.39
DDX41Q9UJV9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
DDX41Q9UJV9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 MIPEPP3-201ENST00000412105 444 ntBASIC23.73■■□□□ 1.39
DDX41Q9UJV9 AL512625.2-201ENST00000417533 625 ntBASIC23.73■■□□□ 1.39
DDX41Q9UJV9 AC093787.1-201ENST00000450396 207 ntBASIC23.73■■□□□ 1.39
DDX41Q9UJV9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.73■■□□□ 1.39
DDX41Q9UJV9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 AC016405.3-201ENST00000607710 860 ntBASIC23.72■■□□□ 1.39
DDX41Q9UJV9 AC243732.1-201ENST00000612648 864 ntBASIC23.72■■□□□ 1.39
DDX41Q9UJV9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 MKRN4P-201ENST00000444706 1521 ntBASIC23.72■■□□□ 1.39
DDX41Q9UJV9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DDX41Q9UJV9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX41Q9UJV9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX41Q9UJV9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.71■■□□□ 1.39
DDX41Q9UJV9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX41Q9UJV9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
DDX41Q9UJV9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.71■■□□□ 1.39
DDX41Q9UJV9 AC069236.1-201ENST00000604339 616 ntBASIC23.71■■□□□ 1.39
DDX41Q9UJV9 AC008694.1-202ENST00000636953 945 ntBASIC23.71■■□□□ 1.39
DDX41Q9UJV9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.71■■□□□ 1.39
DDX41Q9UJV9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
DDX41Q9UJV9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DDX41Q9UJV9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 AL162412.1-201ENST00000567129 965 ntBASIC23.69■■□□□ 1.38
DDX41Q9UJV9 MIR4758-201ENST00000577688 71 ntBASIC23.69■■□□□ 1.38
DDX41Q9UJV9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 AL591742.1-201ENST00000604433 565 ntBASIC23.69■■□□□ 1.38
DDX41Q9UJV9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
DDX41Q9UJV9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
DDX41Q9UJV9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms