Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 AC053503.5-201ENST00000601508 636 ntBASIC19.55■□□□□ 0.72
VAPAQ9P0L0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 AC007952.6-201ENST00000573168 2673 ntBASIC19.55■□□□□ 0.72
VAPAQ9P0L0 AC003957.1-201ENST00000625108 2673 ntBASIC19.55■□□□□ 0.72
VAPAQ9P0L0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VAPAQ9P0L0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.54■□□□□ 0.72
VAPAQ9P0L0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.54■□□□□ 0.72
VAPAQ9P0L0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 AC099778.1-201ENST00000568593 1911 ntBASIC19.53■□□□□ 0.72
VAPAQ9P0L0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 MIR572-201ENST00000384983 95 ntBASIC19.53■□□□□ 0.72
VAPAQ9P0L0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.53■□□□□ 0.72
VAPAQ9P0L0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VAPAQ9P0L0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 AP001330.3-201ENST00000520123 633 ntBASIC19.52■□□□□ 0.72
VAPAQ9P0L0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.52■□□□□ 0.72
VAPAQ9P0L0 AP004607.4-201ENST00000530158 1459 ntBASIC19.52■□□□□ 0.72
VAPAQ9P0L0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
VAPAQ9P0L0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
VAPAQ9P0L0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 PBX2P1-201ENST00000493219 1291 ntBASIC19.51■□□□□ 0.71
VAPAQ9P0L0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VAPAQ9P0L0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.5■□□□□ 0.71
VAPAQ9P0L0 AC096631.2-201ENST00000436136 790 ntBASIC19.5■□□□□ 0.71
VAPAQ9P0L0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms