Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD9Q9P000 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD9Q9P000 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COMMD9Q9P000 AC020763.4-201ENST00000623414 4170 ntBASIC17.56■□□□□ 0.4
COMMD9Q9P000 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COMMD9Q9P000 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.56■□□□□ 0.4
COMMD9Q9P000 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COMMD9Q9P000 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.56■□□□□ 0.4
COMMD9Q9P000 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 AL031602.1-201ENST00000633169 911 ntBASIC17.55■□□□□ 0.4
COMMD9Q9P000 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 AC073314.1-201ENST00000568729 2216 ntBASIC17.55■□□□□ 0.4
COMMD9Q9P000 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COMMD9Q9P000 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COMMD9Q9P000 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COMMD9Q9P000 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COMMD9Q9P000 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.53■□□□□ 0.4
COMMD9Q9P000 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.53■□□□□ 0.4
COMMD9Q9P000 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COMMD9Q9P000 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 AL451085.2-201ENST00000605085 799 ntBASIC17.53■□□□□ 0.4
COMMD9Q9P000 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COMMD9Q9P000 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 AC133637.1-201ENST00000624115 1537 ntBASIC17.52■□□□□ 0.4
COMMD9Q9P000 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
COMMD9Q9P000 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.52■□□□□ 0.4
COMMD9Q9P000 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.52■□□□□ 0.4
COMMD9Q9P000 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.52■□□□□ 0.4
COMMD9Q9P000 UNC93B8-201ENST00000511903 705 ntBASIC17.52■□□□□ 0.4
COMMD9Q9P000 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.52■□□□□ 0.4
COMMD9Q9P000 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COMMD9Q9P000 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
COMMD9Q9P000 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.52■□□□□ 0.39
COMMD9Q9P000 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.52■□□□□ 0.39
COMMD9Q9P000 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms