Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 KRT18P20-201ENST00000548986 1279 ntBASIC21.05■□□□□ 0.96
UBP1Q9NZI7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 AC006128.1-201ENST00000624704 1661 ntBASIC21.05■□□□□ 0.96
UBP1Q9NZI7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBP1Q9NZI7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 AC245052.3-201ENST00000450182 901 ntBASIC21.04■□□□□ 0.96
UBP1Q9NZI7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 AL162430.1-201ENST00000480705 870 ntBASIC21.04■□□□□ 0.96
UBP1Q9NZI7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
UBP1Q9NZI7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 MIR5787-201ENST00000611784 55 ntBASIC21.03■□□□□ 0.96
UBP1Q9NZI7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
UBP1Q9NZI7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
UBP1Q9NZI7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBP1Q9NZI7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
UBP1Q9NZI7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
UBP1Q9NZI7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.02■□□□□ 0.95
UBP1Q9NZI7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 AC137761.2-201ENST00000561729 223 ntBASIC21.01■□□□□ 0.95
UBP1Q9NZI7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 AC145350.3-201ENST00000569033 163 ntBASIC21.01■□□□□ 0.95
UBP1Q9NZI7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
UBP1Q9NZI7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
UBP1Q9NZI7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms