Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
POLR3BQ9NW08 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.31■■□□□ 1
POLR3BQ9NW08 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR3BQ9NW08 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3BQ9NW08 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
POLR3BQ9NW08 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.3■■□□□ 1
POLR3BQ9NW08 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.3■■□□□ 1
POLR3BQ9NW08 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.3■■□□□ 1
POLR3BQ9NW08 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.3■■□□□ 1
POLR3BQ9NW08 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.3■■□□□ 1
POLR3BQ9NW08 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.3■■□□□ 1
POLR3BQ9NW08 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.3■■□□□ 1
POLR3BQ9NW08 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3BQ9NW08 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
POLR3BQ9NW08 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.29■■□□□ 1
POLR3BQ9NW08 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.29■■□□□ 1
POLR3BQ9NW08 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.29■■□□□ 1
POLR3BQ9NW08 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.29■■□□□ 1
POLR3BQ9NW08 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.29■■□□□ 1
POLR3BQ9NW08 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.29■■□□□ 1
POLR3BQ9NW08 POU5F1P4-201ENST00000413175 1085 ntBASIC21.29■■□□□ 1
POLR3BQ9NW08 AL596275.1-201ENST00000423464 877 ntBASIC21.29■■□□□ 1
POLR3BQ9NW08 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.29■■□□□ 1
POLR3BQ9NW08 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.29■■□□□ 1
POLR3BQ9NW08 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.29■■□□□ 1
POLR3BQ9NW08 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.29■■□□□ 1
POLR3BQ9NW08 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.29■■□□□ 1
POLR3BQ9NW08 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.29■■□□□ 1
POLR3BQ9NW08 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.29■■□□□ 1
POLR3BQ9NW08 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.29■■□□□ 1
POLR3BQ9NW08 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.29■■□□□ 1
POLR3BQ9NW08 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.29■■□□□ 1
POLR3BQ9NW08 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.29■■□□□ 1
POLR3BQ9NW08 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3BQ9NW08 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.29■■□□□ 1
POLR3BQ9NW08 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3BQ9NW08 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.28■■□□□ 1
POLR3BQ9NW08 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3BQ9NW08 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3BQ9NW08 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
POLR3BQ9NW08 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.28■■□□□ 1
POLR3BQ9NW08 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.28■■□□□ 1
POLR3BQ9NW08 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3BQ9NW08 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3BQ9NW08 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.28■■□□□ 1
POLR3BQ9NW08 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.27■■□□□ 1
POLR3BQ9NW08 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3BQ9NW08 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
POLR3BQ9NW08 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.27■■□□□ 1
POLR3BQ9NW08 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3BQ9NW08 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.27■■□□□ 1
POLR3BQ9NW08 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.27■■□□□ 1
POLR3BQ9NW08 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.27■■□□□ 1
POLR3BQ9NW08 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.27■■□□□ 1
POLR3BQ9NW08 AC142381.4-202ENST00000563973 229 ntBASIC21.27■■□□□ 1
POLR3BQ9NW08 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.27■■□□□ 1
POLR3BQ9NW08 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.27■■□□□ 1
POLR3BQ9NW08 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3BQ9NW08 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.27■□□□□ 0.99
POLR3BQ9NW08 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
POLR3BQ9NW08 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.27■□□□□ 0.99
POLR3BQ9NW08 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 KRT17P1-201ENST00000399211 1546 ntBASIC21.26■□□□□ 0.99
POLR3BQ9NW08 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 KRT16P2-201ENST00000414673 1423 ntBASIC21.26■□□□□ 0.99
POLR3BQ9NW08 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3BQ9NW08 AL137060.1-201ENST00000618151 2648 ntBASIC21.25■□□□□ 0.99
POLR3BQ9NW08 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3BQ9NW08 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms