Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE1Q9NRR8 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 AC018470.1-201ENST00000624790 3129 ntBASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE1Q9NRR8 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
CDC42SE1Q9NRR8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.7
CDC42SE1Q9NRR8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
CDC42SE1Q9NRR8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CDC42SE1Q9NRR8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
CDC42SE1Q9NRR8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CDC42SE1Q9NRR8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 GOLGA2P6-201ENST00000340929 2049 ntBASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CDC42SE1Q9NRR8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms