Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM9Q9NQV7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 AC005181.1-201ENST00000604782 1256 ntBASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRDM9Q9NQV7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 AF106564.1-201ENST00000607058 2553 ntBASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 AC121338.2-201ENST00000622535 1744 ntBASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 MIR663A-201ENST00000385250 93 ntBASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 CROCCP5-201ENST00000436658 830 ntBASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 AC006970.2-201ENST00000450065 779 ntBASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRDM9Q9NQV7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRDM9Q9NQV7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRDM9Q9NQV7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRDM9Q9NQV7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
PRDM9Q9NQV7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 AL591742.1-201ENST00000604433 565 ntBASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 AC068338.2-201ENST00000563278 1430 ntBASIC19.51■□□□□ 0.71
PRDM9Q9NQV7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 AC091799.1-201ENST00000422823 811 ntBASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 AL162412.1-201ENST00000567129 965 ntBASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.5■□□□□ 0.71
PRDM9Q9NQV7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 AC116050.2-201ENST00000612102 1779 ntBASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
PRDM9Q9NQV7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms