Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 TCF3P1-201ENST00000423021 1937 ntBASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC52A3Q9NQ40 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 MIR572-201ENST00000384983 95 ntBASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC52A3Q9NQ40 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC52A3Q9NQ40 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC52A3Q9NQ40 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC52A3Q9NQ40 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC52A3Q9NQ40 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.58■□□□□ 0.73
SLC52A3Q9NQ40 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC52A3Q9NQ40 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SLC52A3Q9NQ40 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC52A3Q9NQ40 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLC52A3Q9NQ40 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLC52A3Q9NQ40 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 RARRES2P11-201ENST00000635158 484 ntBASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SLC52A3Q9NQ40 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 AC092720.2-201ENST00000602388 1665 ntBASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SLC52A3Q9NQ40 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms