Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 AC091799.1-201ENST00000422823 811 ntBASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 GCSHP5-201ENST00000443090 522 ntBASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TM9SF3Q9HD45 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
TM9SF3Q9HD45 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 AL355472.2-201ENST00000422958 438 ntBASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 AC128676.1-201ENST00000454392 318 ntBASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 FAM21FP-204ENST00000608637 956 ntBASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 KRT17P1-201ENST00000399211 1546 ntBASIC20.68■□□□□ 0.9
TM9SF3Q9HD45 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 AC245052.3-201ENST00000450182 901 ntBASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 UNC93B5-201ENST00000530315 699 ntBASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.67■□□□□ 0.9
TM9SF3Q9HD45 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 CDV3P1-201ENST00000471403 739 ntBASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 AC026366.1-201ENST00000488803 879 ntBASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TM9SF3Q9HD45 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 AL158047.1-201ENST00000445918 881 ntBASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 AP006294.2-201ENST00000641667 209 ntBASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 AC026471.6-201ENST00000622954 1905 ntBASIC20.65■□□□□ 0.9
TM9SF3Q9HD45 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TM9SF3Q9HD45 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.64■□□□□ 0.89
TM9SF3Q9HD45 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF3Q9HD45 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF3Q9HD45 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF3Q9HD45 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF3Q9HD45 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TM9SF3Q9HD45 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.64■□□□□ 0.89
TM9SF3Q9HD45 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms