Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SEC61A2Q9H9S3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 AC104187.1-201ENST00000607510 612 ntBASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 AC008175.2-201ENST00000612840 297 ntBASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SEC61A2Q9H9S3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 AC061975.6-201ENST00000579045 1553 ntBASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SEC61A2Q9H9S3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
SEC61A2Q9H9S3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SEC61A2Q9H9S3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SEC61A2Q9H9S3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.46■□□□□ 0.54
SEC61A2Q9H9S3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.54
SEC61A2Q9H9S3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SEC61A2Q9H9S3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms